Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964632 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60414163 ~ 60426534 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051825.1 | True | 2257 | mRNA | 0.46 | 3 | 60414163 | 60426534 |
60,410,000
60,412,000
60,414,000
60,416,000
60,418,000
60,420,000
60,422,000
60,424,000
60,426,000
60,428,000
60,430,000
60,432,000
60,434,000
60,436,000
60,438,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524214 | LOC106613699 | coding | downstream | 15301 | 60395024 ~ 60398862 (-) |
| lpl | lpl | coding | downstream | 107523 | 60298204 ~ 60306640 (-) |
| LOC110524209 | LOC106613694 | coding | downstream | 124732 | 60282374 ~ 60289431 (-) |
| LOC110524206 | ap1m1 | coding | downstream | 279891 | 60116530 ~ 60134272 (-) |
| klf2a | LOC106613686 | coding | downstream | 432544 | 59979007 ~ 59981619 (-) |
| ccl44 | LOC106613702 | coding | upstream | 33313 | 60459847 ~ 60462194 (-) |
| LOC110524218 | LOC106613703 | coding | upstream | 44778 | 60471312 ~ 60476448 (-) |
| LOC110524219 | LOC106613704 | coding | upstream | 83145 | 60509679 ~ 60513480 (-) |
| LOC110524222 | LOC106613707 | coding | upstream | 178674 | 60605208 ~ 60626475 (-) |
| ndufa11 | LOC106613708 | coding | upstream | 252164 | 60678698 ~ 60682883 (-) |
| G423057 | tpm4 | non-coding | downstream | 20969 | 60368429 ~ 60393194 (-) |
| G423073 | NA | non-coding | downstream | 51217 | 60360590 ~ 60362946 (-) |
| G422481 | NA | non-coding | downstream | 104092 | 60308829 ~ 60310071 (-) |
| G422474 | NA | non-coding | downstream | 117676 | 60296174 ~ 60296487 (-) |
| G423090 | NA | non-coding | upstream | 6806 | 60433340 ~ 60433586 (-) |
| G423102 | NA | non-coding | upstream | 9127 | 60435661 ~ 60436355 (-) |
| G423107 | LOC106613701 | non-coding | upstream | 14765 | 60441299 ~ 60441555 (-) |
| G423108 | NA | non-coding | upstream | 15182 | 60441716 ~ 60441960 (-) |
| G423110 | NA | non-coding | upstream | 15679 | 60442213 ~ 60442418 (-) |
| G422347 | NA | other | downstream | 313107 | 60100765 ~ 60101056 (-) |
| lsg1 | lsg1 | other | downstream | 1275906 | 59131152 ~ 59138429 (-) |
| G420982 | LOC106613655 | other | downstream | 1377864 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 2000020 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 2300103 | 58112387 ~ 58114060 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 632460 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 1190336 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 1223433 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 1232499 | 61659033 ~ 61659585 (-) |
| G424649 | NA | other | upstream | 1461664 | 61888198 ~ 61927422 (-) |
