Gene
RNA
| Item | Value |
|---|---|
| gene id | arhgap45b |
| gene name | LOC106613721 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 61082638 ~ 61096386 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rho GTPase-activating protein 45-like isoform X2 |
| id | description |
|---|---|
| K20644 | ARHGAP29_45; Rho GTPase-activating protein 29/45 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021603699.2 | False | 4690 | mRNA | 0.52 | 21 | 61082638 | 61095399 |
| XM_021603700.2 | False | 4447 | mRNA | 0.53 | 22 | 61082638 | 61095399 |
| XM_021603701.2 | True | 4998 | mRNA | 0.52 | 21 | 61082638 | 61096386 |
61,076,000
61,078,000
61,080,000
61,082,000
61,084,000
61,086,000
61,088,000
61,090,000
61,092,000
61,094,000
61,096,000
61,098,000
61,100,000
61,102,000
61,104,000
61,106,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524239 | LOC106573579 | coding | downstream | 774 | 61058949 ~ 61081864 (-) |
| pip5k1ca | LOC106613719 | coding | downstream | 29237 | 60973143 ~ 61053401 (-) |
| LOC110524237 | LOC106613718 | coding | downstream | 111659 | 60966400 ~ 60970979 (-) |
| LOC110524236 | rb11b | coding | downstream | 116492 | 60952905 ~ 60966146 (-) |
| LOC110524231 | LOC106613717 | coding | downstream | 130996 | 60944007 ~ 60951642 (-) |
| tjp3 | LOC106613722 | coding | upstream | 8371 | 61104757 ~ 61131881 (-) |
| LOC110524243 | LOC106613723 | coding | upstream | 42933 | 61139319 ~ 61242006 (-) |
| trnaa-agc-3 | NA | coding | upstream | 170311 | 61266697 ~ 61266769 (-) |
| LOC110522983 | LOC106613725 | coding | upstream | 207727 | 61304113 ~ 61511078 (-) |
| LOC110524247 | LOC106613727 | coding | upstream | 521601 | 61617987 ~ 61622355 (-) |
| G423394 | NA | non-coding | downstream | 145417 | 60937000 ~ 60937221 (-) |
| G423391 | NA | non-coding | downstream | 149590 | 60932799 ~ 60933048 (-) |
| G423384 | NA | non-coding | downstream | 180883 | 60901516 ~ 60901755 (-) |
| LOC110524228 | LOC106573568 | non-coding | downstream | 198672 | 60861447 ~ 60884008 (-) |
| G423495 | NA | non-coding | upstream | 150172 | 61246558 ~ 61246791 (-) |
| G423497 | NA | non-coding | upstream | 152182 | 61248568 ~ 61248887 (-) |
| G423509 | tm6s1 | non-coding | upstream | 167505 | 61263891 ~ 61265340 (-) |
| G423510 | NA | non-coding | upstream | 169424 | 61265810 ~ 61266048 (-) |
| G423534 | hapln4 | non-coding | upstream | 187177 | 61283563 ~ 61285664 (-) |
| G422347 | NA | other | downstream | 981582 | 60100765 ~ 60101056 (-) |
| lsg1 | lsg1 | other | downstream | 1944381 | 59131152 ~ 59138429 (-) |
| G420982 | LOC106613655 | other | downstream | 2046339 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 2668495 | 58413128 ~ 58414143 (-) |
| G424474 | NA | other | upstream | 520484 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 553581 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 562647 | 61659033 ~ 61659585 (-) |
| G424649 | NA | other | upstream | 791812 | 61888198 ~ 61927422 (-) |
| G424678 | NA | other | upstream | 902140 | 61998526 ~ 62001309 (-) |
