LOC110524266 (LOC106613746)


Basic Information

Item Value
gene id LOC110524266
gene name LOC106613746
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 62328839 ~ 62441794 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603756.2
cttgcgaaacagaccaaacagaccagaccggggtttggggctTGATAAGTTAATGAGAGAAAATAAAAAGTATTCCTTAGTTGTTCATTTTCTCGAAATCTGAATGCACAACCTAGATTCAAGACAAGTACTTAAGTagctgaacatgttattactccaacctcgagAAAGTGATAAactgaaacatttttatttagtatacaacaactttatatcgaaggagtgcctttgatttgtTTGAGTTTAGCGCGAGACGACCATCAGACACGATTACGTTTTTATACGCATGCGCTTTGCTAGTcaacgtcgccatgacatcgcctacaactgtgatcggggatttctattggagaagcagttttacCCTATCTTCATATTGTACTGTCTTTGGTTTGGAGCATGGAGTGTGTAAACAAGATGGAGGCGTTTCTGACATCCAGCACTTCTACATGGGCAATCGATGATATCGGTCAAGTAGCATACAAGATCTGAGGATCCCTGCATCGATTCATTGACGCTGGCAGACCAGTTTTGCAGTCTTGGCAAGTACCCCGGatttattcggtacatgggatGGAGGTAGAAAATTAGATCAGCTAAACATTGTAGAAGAACTCAATGAAAATCATATACCTGATTCACAATTAAGTTGCCCACAACATGACATTCACCAATAACCAAAGAAAGCTGCACACATCACAACACTGCAGGTCCCAGGTGTCACAAGGACATGGCTAAGGAGGGAATAGGCCTATATCATCAGAGAACAAAGAACTAAACCATTCCCTCATACCATAGCCAGACATTGTAATATTGGACAGTACCCAAACTCAGTCCACTCACTTCTCTGCTCAAGCAGTGCTGCATGGTCAGCAGGTTAAGGTGAACATTCTGTAGCCTTTCTGCAGTTGCAGCATCCTGCATTTCAATATTCAGTATTGGAATATTTTTCTTGCAATTTCGTACAGTCCGACCCAGGGCATCCAGAAacaaacagtacagtagtattaaAGAACAGTCAAGTTGCTGAAGGGGCAACCATGAATGACGAGGACATCCATGAACACATGGACTATTTGGAGAATGACTTGACCATGTGCATGGAAACCTTCATCCACCGCATCGACTCCACTGAAGTCATCTACGAGCCGCGGAGGAAGAAGGCCAAGCTGATTGGGAAGTACCTGATGGGAGACCTGCTGGGGGAGGGCTCCTACGGGAAGGTGAAGGAGATGCTGGACTCTGAGACCCTCTGCAGGAGGGCAGTCAAGATCCTCAAGAAGAAGAAGCTGAGACGCATCCCCAATGGGGAGCAAAATGTAAAAAAAGAGATTCAGCTGCTACGAAGATTAAGGCACAAGAATATTATCCAGTTGGTTGAAGTTTTGTATAATGAGGAGAAGCAAAAGATGTATATGGTGATGGAATATTGTGTATGTGGAATGCAGGAGATGTTGGACAGTGTTGATGAGAAAAGGTTTCCAGTCTTTCAAGCTCATGGGTACTTTTGCCAGCTGCTAGATGGCTTGGAATATTTGCACAGCCAAGGAATAGTTCACAAAGATATTAAACCAGGGAATCTACTGCTGACGACGGATGGCGCACTAAGAATCTCCGACCTGGGTGTAGCAGAGGCGCTGCACCCATTTGCAGAGGACGACACATGTTGTACGAGCCAGGGCTCTCCGGCCTTCCAGCCCCCAGAGATTGCCAACGGCCTGGACACCTTCTCAGGGTTCAAAGTGGACATCTGGTCTGCTGGTGTCACACTttATAACATAACAACCAGCCTGTACCCTTTCGAAGGTGACAACATCTATAAGCTGTTTGAGAACATTGGGAAGGGAGACTACAGTGTTCCAGAGGAGTGTGGCCCTCTGCTCTCTGGCCTGTTAAGAGGAATGCTTGAGTATGACCCTGAGAAGAGGTTCTCAATACAAAACATTAGACAACACAACTGGGTAAGGAAGAAACACCCTGCAACGGAGCCTCTGGTGCCCATGCCCCCTAGTGCTGATCGGAGGGACGCGTGGCGTAGCATGACCGTACTGCCCTACCTGGAGCACCTGCACGGCTACGCCGACCAGGACGACGAGGATGACGACGAACTCTTCTACGGAGACGGAGAGATCATCTACTCTCAGGGTTTCACTATGACAGGTCGGGTGCATGAGGATGGGCTGGAGCAGAACGGGCACCAGGGGGGTTGTGTGGGGccggggctggggctggggctcaGGACCCTATGTGTGAACGGCACGGAGACAGACCAGGACCACTACCCAACCACCAGCAGGACCAGGTCCCGATCAgaacgcctctcctcctcctcctcctccaacccctcACGCAAAGGAGTGTCCACCTACAGCCGCATCCGCAAGCTGTCCAACTGCAAGCAGCAATGAGGGCAGCCCCTGGACCCCCAGCCCTGAACACATATACTGGACAGGTTTGTGTTCTCTATTTTCCGGCTCCCTGACGTTTGGGTGATGAATGTTTTGACAGCCTGGTCTGCAGCATGCAATAACAGGACATGATGCACTACAGTGGTTTATTTCACTAGTTATTTTCTGTCTGACAACGTAAGTGAAGCTCcagagagaaatggagaagaGGCTAGGACTTACCCCCTTCTGCAGATCATACTGGGAATCCCACCCCTCACTGTATGAATGTAGCTCGTTTTAGACTACTACACTGTTTCTCCTACAGTTACTCTGTATTAAAGCGCACATTGTGATGTGTATTGAATGACATGGGTCATTTCAATAAACTACAATATTTGTAACGGTAATAAGTATGATCATTTAATAAGAAATGCATTAACGGCATATGCAGGCTAAAGAAAAGGGAACTATAGACAAGCCAAGGATGCATAACTATTCGAGAATGTCTTtgctttagatttttttttgcatcTTTAGTTTTGGTGTTTTAGTCCCCAAAATgggttttaattattatttatatAAAATGCACCCCAACCTCACCAGCTGTTTGTTCTGTGATTTTTCTCTTTATTTGTGGCTGTATTATAAATAAATGTATCTTGTCAATCAAACAA

Function

NR:

description
serine/threonine-protein kinase STK11-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K07298 STK11, LKB1; serine/threonine-protein kinase 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603756.2 True 3067 mRNA 0.46 11 62328839 62441794

Neighbor

gene id symbol gene type direction distance location
atp5f1d LOC106613744 coding downstream 47100 62277289 ~ 62281739 (-)
midn LOC106613743 coding downstream 77093 62217498 ~ 62251746 (-)
cirbpb LOC106613741 coding downstream 236815 62084453 ~ 62092024 (-)
LOC110524260 LOC105011525 coding downstream 245537 62076569 ~ 62083302 (-)
si:ch211-212d10.2 LOC106613739 coding downstream 290845 62033465 ~ 62037994 (-)
LOC110524270 LOC106613752 coding upstream 144444 62586238 ~ 62680215 (-)
LOC118964634 NA coding upstream 354823 62796617 ~ 62797240 (-)
LOC110524277 LOC106613757 coding upstream 362038 62803832 ~ 62808176 (-)
LOC110524279 LOC106613762 coding upstream 477784 62919578 ~ 63214903 (-)
LOC110524282 LOC106584262 coding upstream 815803 63257597 ~ 63260481 (-)
G424823 NA non-coding downstream 46463 62282172 ~ 62282376 (-)
G424809 NA non-coding downstream 67539 62260983 ~ 62261300 (-)
G424808 NA non-coding downstream 69933 62258656 ~ 62258906 (-)
G424807 NA non-coding downstream 73052 62255519 ~ 62255787 (-)
G424806 NA non-coding downstream 73511 62254402 ~ 62255328 (-)
G424878 NA non-coding upstream 35138 62476932 ~ 62485576 (-)
G424903 NA non-coding upstream 52695 62494489 ~ 62494789 (-)
G424927 NA non-coding upstream 87522 62529316 ~ 62606813 (-)
G425568 NA non-coding upstream 353942 62795736 ~ 62796548 (-)
G425587 NA non-coding upstream 366765 62808559 ~ 62809332 (-)
G424678 NA other downstream 327530 61998526 ~ 62001309 (-)
G424649 NA other downstream 401417 61888198 ~ 61927422 (-)
G424502 NA other downstream 669254 61659033 ~ 61659585 (-)
G424499 LOC106613729 other downstream 677064 61649967 ~ 61651775 (-)
G424474 NA other downstream 711595 61616870 ~ 61617244 (-)
G425612 NA other upstream 408210 62850004 ~ 62850247 (-)
G425647 NA other upstream 452865 62894659 ~ 62900503 (-)
G425810 LOC106613766 other upstream 859130 63300924 ~ 63303394 (-)

Expression


Co-expression Network