LOC110524297 (LOC106613775)


Basic Information

Item Value
gene id LOC110524297
gene name LOC106613775
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 63492427 ~ 63502367 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603819.2
CAATTGCCATGGCATGATGGCTCAGACTCGCGATTTTTTGGAAGACTCCCCATGTTGCTGCTTCCTGTACTGAAACACCGAATTCCGTCTCCGCAGTCTGCAACCAAGCTTCACACCCCGGCTCCATACAGGGAAAGGTCTACAAGTGTACCCCTTTAACCTTCGAACGCTAACAATCCTCGGTCAGTGACCAGACAGTCCTGTCAACCACAGCCGTTGTCCTTGTGGCGAGGGCCGCTCTGATTTGAGGAACGCAGCACACGATTTCCGTAGGGGAGGTGGTGCTTGCTGGACAAGAAGCGAAAGGAACAGTAATGTGTACAAATCTAGTGTACTATTATAgctagttgttttttttaaatataccttACTCGTTAGATATCTAAAATAGTCAAATGCACCTGACCTGATGGTGACGTGCATGTGTGATTGTCCTTACAAACATCTATCTGTCATGCTCGCAAAGTAACTAGCTGGCTAAGCCACTAACAGCCAGCAACATTTACCCCTGTTGCTGTTTTAGAACAACTTTGAATTATCAGTTCCTTGTACTGATTTGCTTCGGAAAGTCGTCCAGGGCACTGTAAAATATTTCGATATGGCTCCGAAGAGAAGACCCGTTCCTCTAAATATCACGCCCATTGGAGAGGGGCAGTCCATCTCCACAACCATTGATGCTGCGTCTGAAGCCAATCTGGAGGCCTTACAAAAGAAGCTAGGAGAGCTAGATTTGGACGAACAGCAGAGGAAACGTCTGGAGGCTTTCCTCACCCAGAAAGCCCAAGTGGGCGAGCTGAAAGATGATGATTTCCACCCCATATGTGAGCTGGGCGCTGGCAACGGTGGAGTGGTCAACAAGGTCCGCCACAAACCCTCCAGACTGGTCATGGCCCGAAAGCTCATCCACCTGGAGATTAAGCCTGCCATCAGGAACCAGATCATCAGAGAGCTGCAGGTGCTGCATGAGTGCAACTCTCCCTACATCGTGGGCTTCTACGGGGCCTTCTACAGCGACGGAGAGATCAGTATCTGCATGGAGCACATGGATGGAGGCTCTCTGGATCAGGTGCTGAAGGAAGCCAGGAGAATCCCTGAGGAGATCTTGGGCAAAGTCAGCATAGCAGTACTCCGAGGACTTGCCTATCTGCGTGAGAAGCACCAGATCATGCACAGAGACGTCAAGCCCTCCAACATCCTGGTGAACTCGCGCGGGGAGATCAAGCTGTGTGACTTTGGCGTGAGTGGCCAACTCATCGACTCCATGGCCAACTCCTTCGTGGGAACGCGCTCCTACATGTCGCCGGAGAGACTGCAGGGCACACACTACTCTGTGCAGTCGGACGTGTGGAGCATGGGCCTGTCCCTGGTGGAGCTGGCCATCGGCCGCTACCCCATCCCCCCGCCTGATGCCAAGGAGCTGGAGGCCATCTTTGGCCGGCCCGTACAGGACGGAGCCGAGGGGGAACCACACACCATCTCCAACCGCCTCCCCAGACCACCAGGAGGGCGACCAGTCAGCGGACATGGGATGGACAGTCGACCAGCCATGGCGATATTTGAGCTGCTGGACTACATTGTCAATGAGCCTCCTCCCAGGCTGCCACTTGGTGTCTTCACCAACGATTTCAACGAGTTTGTGACTAAATGTCTGATCAAGAATCCAGCAGAGCGAGCTGACCTGAAGATGCTGATGAACCACACGTTTATCAAACGTgctgaggtggaggaggtggactTTGCTGGCTGGATGTGTAAAACCATGGGTCTCAACCAACCCAGCACCCCCACCCGTGGCACTGAATGAGAAACCCAACGCCAGCTGCTTCCCACATGAGGATCCCCAGtgcctcactgtctctctctctctcacacacacacactttggcacCCCTTTCGTCTTGCTCTTAAGAGGTTTCAGCTCTTAAGTATACTTATCATCAACAGGGCCCATTTACCCATTGTATGACCACAGGTTTCCCATACCAGTGTCGTGGTAGAGTCACACACATGCTATTTTCTCCTATCATATTAAAGATGAGGTACAAAGCATGGAAGGACTGCCAGTTTATCATTTCATGAATTGCCATTGATATCATCTTACCACTTGTATTGGTAAATTATGTTCATGGTATACCATGGTATACTAATGTTTTGGATATCATGCCTGATCAAAGTACTTAGTTTTGTACATTCATGACCAGTACATTTTTGAGAGAGGAGTACTTTCAATGttgacatttttatttgattttaatgGTCATTAAACACTGTAAAATGAACATCAAATGTGCTCATTTTACAAAATGGAATGATTTACGATCTTATATTTTCCAGACACCCGGGGTCATTATTTTGTTTTAACTTGTATTTGTATCAACTGCCTGAAACTCATTTGTCAAGTTAGAATCTCTCAAACCGTGACTACAGATGCTCTGAAAGGTTCCGATTTTTGCCAGTCTACTCAATTTATTCCCCAGAGTGTTTTTCGGTTCTGCTCCACTGTTTTGCTTTGCGTGAGTAAGTGTAACCTACACTCCAAGCGTTCTCTTTGTGAAGCCCCGGTGTGGTGACTGGCTTTGTGCAGGTGGGTGGGTGGTGGTTGTAACATGTATTAATTAGCCTGTCGTCTATAAGAgcccatgtactgtatgtattctctGCTTCTGGCTGATTTTATCATTCTCAAAGTGGATGCATTGTCGCCTGTATGTGTATAAAGCTATATAAACAGTACGCAAGTACAATTTAGCAGTCttaagaaaaaaaatgtttttgactCGTATAGGGGGAAGTGGAAGAGAtgtcattttattttaaaatgtgttGGATACGGTTGTAATGTAAAAATAAAACTTTGGATGTATATGGCAA

Function

NR:

description
PREDICTED: dual specificity mitogen-activated protein kinase kinase 2

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04369 MAP2K2, MEK2; mitogen-activated protein kinase kinase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603819.2 True 2871 mRNA 0.48 11 63492427 63502367

Neighbor

gene id symbol gene type direction distance location
LOC110524292 LOC106613773 coding downstream 822 63462504 ~ 63491605 (-)
LOC110524290 LOC106613772 coding downstream 48998 63417964 ~ 63443429 (-)
LOC110524293 LOC106613771 coding downstream 82976 63402446 ~ 63409451 (-)
si:dkey-110c1.10 LOC106613769 coding downstream 90178 63380799 ~ 63402249 (-)
btbd2a LOC106613767 coding downstream 178136 63303764 ~ 63314291 (-)
LOC110524294 LOC106613774 coding upstream 249 63502616 ~ 63535065 (-)
lingo3a LOC106613778 coding upstream 201253 63703620 ~ 63744699 (-)
org LOC106614011 coding upstream 278362 63780729 ~ 63783015 (-)
LOC110524304 oaz1 coding upstream 296529 63798180 ~ 63803024 (-)
LOC110524306 amh coding upstream 315513 63817880 ~ 63822170 (-)
G425811 NA non-coding downstream 75240 63409798 ~ 63417187 (-)
G425892 NA non-coding downstream 158852 63333058 ~ 63333575 (-)
G425886 NA non-coding downstream 169415 63322471 ~ 63323012 (-)
G425820 NA non-coding downstream 201650 63290446 ~ 63290777 (-)
G425881 NA non-coding downstream 202415 63289718 ~ 63290012 (-)
G425962 NA non-coding upstream 8821 63511188 ~ 63511413 (-)
G425963 NA non-coding upstream 10533 63512900 ~ 63513962 (-)
G425964 NA non-coding upstream 13881 63516248 ~ 63516504 (-)
G425966 NA non-coding upstream 16154 63518521 ~ 63518796 (-)
G425968 NA non-coding upstream 21546 63523913 ~ 63524112 (-)
G425810 LOC106613766 other downstream 189033 63300924 ~ 63303394 (-)
LOC110524282 LOC106584262 other downstream 231958 63257597 ~ 63260481 (-)
G425647 NA other downstream 591924 62894659 ~ 62900503 (-)
G425612 NA other downstream 642180 62850004 ~ 62850247 (-)
LOC110524277 LOC106613757 other downstream 684305 62803832 ~ 62808176 (-)
LOC110522986 LOC106613472 other upstream 781601 64283744 ~ 64297376 (-)
G427287 NA other upstream 1064314 64566681 ~ 64568380 (-)
LOC110524330 LOC106613802 other upstream 1199507 64701867 ~ 64810664 (-)
LOC110524332 LOC106613803 other upstream 1402678 64903039 ~ 64911196 (-)
G427902 ubxn6 other upstream 1497341 64999708 ~ 65011598 (-)

Expression

LOC110524297(LOC106613775) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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LOC110524297(LOC106613775) Expression in each Bioproject

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LOC110524297(LOC106613775) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
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Co-expression Network