LOC110522984 (cssa23h19orf60)


Basic Information

Item Value
gene id LOC110522984
gene name cssa23h19orf60
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 64158413 ~ 64169374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110522984
ATGAGGTACCCAGACTTTCAAGCATTGGCCCATTGACTGTATGCTGTTCAAGCTGAAAGGCTTTTCAATGAAGGCCATGAAGCATACATGAGGACAGGGCCCCACTATGACTTTGACCACTACAGACAGCTGGTGGACGAGAACGCAAGCTTTCTGTGGCCTCTTGAAGAAGGTGTTGGAGATCAAGGAGCGGCTGCACCAGGACTTTGCCTGTCCAGAGCTTTCTGGACACTTAGACAAGCTGCATAGTAAGGAGAAGCAAAAattatcagtgACGGCCAAGCTGCAGCTGGCAAAGCAGAAGGCTCAGGATCACCCAGTGGATGAGGGCTGTCAGGAGAAGATCCAGGAGATCAAGCAGGACATCATAAAAAATAAAGAGGCCCTGAGTGAGATCCTGCAGAACTTTAAATACGACTAGGAGGAGTCGTAG

Function

NR:

description
PREDICTED: uncharacterized protein C19orf60 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110522984 True 433 mRNA 0.49 6 64158413 64169374

Neighbor

gene id symbol gene type direction distance location
tmem59l LOC106613787 coding downstream 14627 64132577 ~ 64143786 (-)
ssbp4 LOC106613785 coding downstream 96130 63929231 ~ 64062283 (-)
fkbp8 LOC106613784 coding downstream 232828 63912451 ~ 63925585 (-)
LOC110524308 LOC106613783 coding downstream 246811 63869346 ~ 63911602 (-)
LOC110524305 dot1l coding downstream 304179 63827147 ~ 63854234 (-)
LOC110524318 LOC106584418 coding upstream 74145 64243519 ~ 64246283 (-)
LOC118964635 LOC106613472 coding upstream 109240 64278614 ~ 64283386 (-)
LOC110522986 LOC106613472 coding upstream 114370 64283744 ~ 64297376 (-)
LOC110524322 LOC106584412 coding upstream 209676 64377557 ~ 64382546 (-)
LOC110524323 LOC106613797 coding upstream 237855 64407229 ~ 64416757 (-)
G426777 NA non-coding downstream 67677 64090430 ~ 64090736 (-)
G426695 NA non-coding downstream 207135 63949454 ~ 63951278 (-)
LOC110524304 oaz1 non-coding downstream 355415 63798180 ~ 63803024 (-)
G426626 NA non-coding downstream 389392 63741961 ~ 63769021 (-)
G426842 LOC106613471 non-coding upstream 31866 64201240 ~ 64205818 (-)
G426851 LOC106613471 non-coding upstream 59734 64229108 ~ 64231040 (-)
G426864 NA non-coding upstream 68256 64237630 ~ 64237921 (-)
G426865 yo84 non-coding upstream 70529 64239903 ~ 64240186 (-)
G425810 LOC106613766 other downstream 855019 63300924 ~ 63303394 (-)
LOC110524282 LOC106584262 other downstream 897944 63257597 ~ 63260481 (-)
G425647 NA other downstream 1257910 62894659 ~ 62900503 (-)
G425612 NA other downstream 1308166 62850004 ~ 62850247 (-)
LOC110524277 LOC106613757 other downstream 1350291 62803832 ~ 62808176 (-)
G427287 NA other upstream 397307 64566681 ~ 64568380 (-)
LOC110524330 LOC106613802 other upstream 532500 64701867 ~ 64810664 (-)
LOC110524332 LOC106613803 other upstream 735671 64903039 ~ 64911196 (-)
G427902 ubxn6 other upstream 830334 64999708 ~ 65011598 (-)

Expression


Co-expression Network