LOC118964532 (LOC106614015)


Basic Information

Item Value
gene id LOC118964532
gene name LOC106614015
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66389023 ~ 66391922 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976524.1
TGAAGGATTTGACCACCCAGAGCTACACCCTATATAGTAGCTGCTTAGACCATGTGAATGAACTGGATGATCTGCTGGAGAACAGATCTGTGCACAAGGTCAGCTGTAGGAGCAGAAGACAGAGCAAGCCAAAGTGGCAGCAGTCTCCAGATTCCTATGTTGACTCAAGCTCAGGTTGTAGCCTTACTACTGAATATGACTCTGAATTTGACTCTTTCTACAACACGGCAAGTGAACTTGATACAAAGGGGAAACCTTCATTTTCCTCCAAATGTCATGTCGAGTTACCGTCTGACTGCAGACAGTGCAGGTCTATGCACCTGTGTAACAATGATGGTGGCAGGTGCGTCGACATCAGGGTGGACACTCCAGATTCCAGAAACAaaaccaccaccagcagtaaGACTGAGGACAGCTTTTGGCCTCTGAGCATTATGGGGTCATCTGATTATATCAGCTCATTTAACTCCTGGTCCTCCCTCAGCTCCTCAAGATCCAGTCTATCCACTCTTGTGTCTGTAAGATCTGAGATGAGTGAAGCGATCCATGCTCCACAAGTGGTTTCCAAGGATGAgccatgctctactaacaaagGTCCTGCTGGCAGGTCAGAGTTGAATAACCCACTACCAGTAGAATTGCAGGGGATGCACAGTCTTGAGAACAGTATCTGGAAAGAGGCCACAAAGAAGATTCCTGAGCTTGTTTTCAATGTTGAAGAGGAAAAACATCGAACTATGGTGTGTGACAAAGTTACAGATCCCGAACAGGAAAATGCAAAGACCCCATTTCAAAAAAGCCTTGCCATGTTTGAATATCTTATCAAAATGAAGGGAAAATCTTTTGGCAAATTATCAAAAATGAACTCTACTGATATATCCCGGGTAGCCTTCAATGATCAGAAACGGGAAAAGATGGATCTCTTGTCTAAGCCACAGGGAAATTCTTGTCCTAACAAGTTAGTGAAGAAGCTAGTCGGACCAGGTATTCACATCCCTATACCCAGAGTGAAACATGTTTTATTAATGGAAAAGGCATCCATTCAACTTCTTGAGATGAACCTGAAACAGAAGCGTTTGGAAAATGTATTGGGAGCGCCCACCATCTTCAGCAAGTCCATGGAACTGATCACACCCGGAGAAACTTCTCAGCCTAAGGAAGTGACATCATCAGAGGTAGAGTTGGAATTGAATTGCTCTAAGACTCTTTTCATCAGCAAAGAAATGAGAGACAAGCTAGAGTTCCACATCAAACGCAAGAAAATCCAACACCTCTGGGGTTTGCCTCATGTGGTGACAAAGTCTATTGAAGCCCTTATTCTCAAGGCACCAAAGATAGACCATAGCAGAGTTTCCCCAAAGCCCAAGTATGACATAGAGGTGATGACAAGTGACTTGCCATTTTTGACTGACGAACAGAAAGAGGCTTTAGAGGGCAATGTGAGGAAAAAGAAGGCTCACAAAAACTGGGGTTACCCAAAACGGATAATGGACTCTCTGAAGGCATTTGAGGTTCCTGAGGGTGTGGCCAAAGACCTGTACAAGAGACGTCGCCCTGGAGCCAAAGTCCAACACCCCCGAGCGGCCTCTAAGGTTAAGGATATCCCTGTGGAGCCCAAAGAGCCTCAGACATCAGCTACATCCAAAACCAACGACCTCAAAGAAATTAGTAAAAAACAACAGAACAACCAGAACAACTCCCATAGCCTATCAGAATCCAGTGTCACTGAGATTCAAGAAAGAGGATTTCCCAAAGTCGCTTTTGGGCCTTTTTCTAAGAAGTGTTTTCATTCCGAGTATCCAGTACTCACAACGTGTTTGAAATGTGAATCAAATCTAAATAAATATTCACTACACAAAGAATCCAACGTGCACAGAGAGTTGATAGCAAGGAGCACagaaggggagggaagagacaaTGCATCCCCATttccacagacacagacaacctGTCTGTCAGAGCAGCCATCAGTGTCAACTAGCAGACCCTGCAGGAAGGAACATCACTGAGTCCTGAAGGAAGAAAAGTTTATTTCCCTCAACATGAGTCCTCTTTCTGaagaaataattatttattttgatcAACATCAAATAAATACCGATATTAGTATTTTGCATTTATCCCTTAATTCTGTGCAATATTTTTAGGTGAGCTGGAGTAGTTTCAGAAAGTAAACACTAGGGGGACACATTCTCTTAGGATTTGAGCACTGATCTAAATGTACTAAACCagataaaacaaatgtttttggtttacctttatttaactaggcaagtcagttaagaacacattcttattttcaatgacggcctaggaacagtgggttaactgccttgttcaggggaagaacaacagatctttactttgtcagctcagggattcgatcttgcaacctttcagtgactagcccaacgctctaaccactaggcaacctgacACCCCAAATATATAATGTAAGATATAAACTCTCCTACAAATTTATTTGGGCAGCAGTGCtagacttggactgaaataggtgccgaTGCTCATTTTGGgggctggtactgtttatatttaggtgcaggagctccacaatacctACAAAGCTAAAcggtgcttaatttgtaaatcgggAGGCAACAACATAAAGTGAGCACGATAGGGGGGTGACCTGGAGAGCTCTGAGATACCGGAAaatcacctttataataaagcattgcatgcatatcaTTGCATTTTTGAAGTGGTCTCGACTAGAGGAGTGGAGGTATATAAATTCAacttgtaaaatgttggtcccatgttttattagctgaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106614015

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976524.1 True 2797 mRNA 0.43 2 66389023 66391922
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Neighbor

gene id symbol gene type direction distance location
adamts10 LOC106613844 coding downstream 53678 66281727 ~ 66335345 (-)
myo1f LOC100380684 coding downstream 105568 66253710 ~ 66283455 (-)
acer1 acer1 coding downstream 139795 66244380 ~ 66249228 (-)
mllt1a LOC106613842 coding downstream 147885 66213497 ~ 66241138 (-)
rfx2 LOC106613840 coding downstream 213900 66106837 ~ 66175123 (-)
LOC110524386 NA coding upstream 122551 66514473 ~ 66521372 (-)
LOC110524385 NA coding upstream 262569 66653328 ~ 66659138 (-)
LOC110524389 LOC106584359 coding upstream 274615 66666537 ~ 66676709 (-)
LOC110524390 LOC106613856 coding upstream 328840 66720762 ~ 66736749 (-)
LOC118964717 LOC106584253 coding upstream 360204 66752126 ~ 66764500 (-)
G429304 LOC106613848 non-coding downstream 5234 66379720 ~ 66383789 (-)
G429348 NA non-coding downstream 22589 66365438 ~ 66366434 (-)
G429342 NA non-coding downstream 31238 66357533 ~ 66357785 (-)
G429274 NA non-coding downstream 178169 66208978 ~ 66210854 (-)
G429255 NA non-coding downstream 211969 66176799 ~ 66177054 (-)
G429419 NA non-coding upstream 89382 66481304 ~ 66482287 (-)
G429395 NA non-coding upstream 97633 66489555 ~ 66489780 (-)
G429421 NA non-coding upstream 101510 66493432 ~ 66493633 (-)
G429457 NA non-coding upstream 151871 66543793 ~ 66544061 (-)
G428132 NA other downstream 1006433 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 1377425 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 1478025 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 1656051 64701867 ~ 64810664 (-)
G427287 NA other downstream 1820643 64566681 ~ 64568380 (-)
LOC110524398 LOC106613863 other upstream 395129 66786837 ~ 66793995 (-)
lrrc7 LOC106613881 other upstream 1418683 67810595 ~ 67983549 (-)
bend5 LOC106584333 other upstream 1948282 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 2307899 68699821 ~ 68707448 (-)
G432338 NA other upstream 2358295 68748558 ~ 68755057 (-)

Expression

LOC118964532(LOC106614015) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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LOC118964532(LOC106614015) Expression in each Bioproject

Bar chart with 20 bars.
LOC118964532(LOC106614015) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
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Co-expression Network