Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964717 |
| gene name | LOC106584253 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 66752126 ~ 66764500 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cathepsin L1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118964717 | True | 1152 | mRNA | 0.49 | 7 | 66752126 | 66764500 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524390 | LOC106613856 | coding | downstream | 15377 | 66720762 ~ 66736749 (-) |
| LOC110524389 | LOC106584359 | coding | downstream | 75417 | 66666537 ~ 66676709 (-) |
| LOC110524385 | NA | coding | downstream | 92988 | 66653328 ~ 66659138 (-) |
| LOC110524386 | NA | coding | downstream | 230754 | 66514473 ~ 66521372 (-) |
| LOC118964532 | LOC106614015 | coding | downstream | 360204 | 66389023 ~ 66391922 (-) |
| LOC110524398 | LOC106613863 | coding | upstream | 22337 | 66786837 ~ 66793995 (-) |
| cep19 | cep19 | coding | upstream | 35128 | 66799628 ~ 66801724 (-) |
| aqp12 | LOC106613865 | coding | upstream | 119189 | 66883689 ~ 66885402 (-) |
| ankmy1 | ankmy1 | coding | upstream | 291159 | 66978887 ~ 67068645 (-) |
| LOC118936331 | dnajc19 | coding | upstream | 746952 | 67511452 ~ 67513347 (-) |
| G429574 | NA | non-coding | downstream | 3274 | 66744888 ~ 66748852 (-) |
| G429572 | NA | non-coding | downstream | 10669 | 66741070 ~ 66741457 (-) |
| G429565 | NA | non-coding | downstream | 13993 | 66729360 ~ 66738133 (-) |
| G429563 | NA | non-coding | downstream | 31589 | 66720321 ~ 66720537 (-) |
| G429556 | NA | non-coding | downstream | 43211 | 66708275 ~ 66708915 (-) |
| G429599 | NA | non-coding | upstream | 3193 | 66767693 ~ 66767896 (-) |
| G429583 | NA | non-coding | upstream | 20437 | 66784937 ~ 66785490 (-) |
| G429580 | NA | non-coding | upstream | 45513 | 66810013 ~ 66812758 (-) |
| G429617 | NA | non-coding | upstream | 73676 | 66838176 ~ 66839233 (-) |
| G429620 | NA | non-coding | upstream | 117542 | 66882042 ~ 66882304 (-) |
| G428132 | NA | other | downstream | 1369536 | 65370116 ~ 65382590 (-) |
| G427902 | ubxn6 | other | downstream | 1740528 | 64999708 ~ 65011598 (-) |
| LOC110524332 | LOC106613803 | other | downstream | 1841128 | 64903039 ~ 64911196 (-) |
| LOC110524330 | LOC106613802 | other | downstream | 2019154 | 64701867 ~ 64810664 (-) |
| G427287 | NA | other | downstream | 2183746 | 64566681 ~ 64568380 (-) |
| lrrc7 | LOC106613881 | other | upstream | 1046105 | 67810595 ~ 67983549 (-) |
| bend5 | LOC106584333 | other | upstream | 1575704 | 68331871 ~ 68352828 (-) |
| G432310 | LOC106613894 | other | upstream | 1935321 | 68699821 ~ 68707448 (-) |
| G432338 | NA | other | upstream | 1985717 | 68748558 ~ 68755057 (-) |
