Item | Value |
---|---|
gene id | LOC110524398 |
gene name | LOC106613863 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 66786837 ~ 66793995 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
Transposable element Tcb2 transposase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036978152.1 | False | 1958 | mRNA | 0.39 | 7 | 66786837 | 66792056 |
XM_036978155.1 | False | 1936 | mRNA | 0.39 | 7 | 66786837 | 66792066 |
XM_036978154.1 | False | 1951 | mRNA | 0.39 | 7 | 66786837 | 66792136 |
XM_021603995.2 | False | 1975 | mRNA | 0.39 | 7 | 66786837 | 66792430 |
XM_021603996.2 | False | 2122 | mRNA | 0.39 | 7 | 66786837 | 66792938 |
XM_036978153.1 | False | 2032 | mRNA | 0.39 | 7 | 66786837 | 66793995 |
TU486620 | True | 2614 | TUCP | 0.41 | 2 | 66787051 | 66789836 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118964717 | LOC106584253 | coding | downstream | 22337 | 66752126 ~ 66764500 (-) |
LOC110524390 | LOC106613856 | coding | downstream | 50088 | 66720762 ~ 66736749 (-) |
LOC110524389 | LOC106584359 | coding | downstream | 110128 | 66666537 ~ 66676709 (-) |
LOC110524385 | NA | coding | downstream | 127699 | 66653328 ~ 66659138 (-) |
LOC110524386 | NA | coding | downstream | 265465 | 66514473 ~ 66521372 (-) |
cep19 | cep19 | coding | upstream | 5633 | 66799628 ~ 66801724 (-) |
aqp12 | LOC106613865 | coding | upstream | 89694 | 66883689 ~ 66885402 (-) |
ankmy1 | ankmy1 | coding | upstream | 261664 | 66978887 ~ 67068645 (-) |
LOC118936331 | dnajc19 | coding | upstream | 717457 | 67511452 ~ 67513347 (-) |
lrrc7 | LOC106613881 | coding | upstream | 1016600 | 67810595 ~ 67983549 (-) |
G429583 | NA | non-coding | downstream | 1347 | 66784937 ~ 66785490 (-) |
G429599 | NA | non-coding | downstream | 18941 | 66767693 ~ 66767896 (-) |
G429593 | NA | non-coding | downstream | 25202 | 66761380 ~ 66761635 (-) |
G429588 | NA | non-coding | downstream | 31495 | 66755125 ~ 66755342 (-) |
G429574 | NA | non-coding | downstream | 37985 | 66744888 ~ 66748852 (-) |
G429580 | NA | non-coding | upstream | 16018 | 66810013 ~ 66812758 (-) |
G429617 | NA | non-coding | upstream | 44181 | 66838176 ~ 66839233 (-) |
G429620 | NA | non-coding | upstream | 88047 | 66882042 ~ 66882304 (-) |
G428132 | NA | other | downstream | 1404247 | 65370116 ~ 65382590 (-) |
G427902 | ubxn6 | other | downstream | 1775239 | 64999708 ~ 65011598 (-) |
LOC110524332 | LOC106613803 | other | downstream | 1875839 | 64903039 ~ 64911196 (-) |
LOC110524330 | LOC106613802 | other | downstream | 2053865 | 64701867 ~ 64810664 (-) |
G427287 | NA | other | downstream | 2218457 | 64566681 ~ 64568380 (-) |
bend5 | LOC106584333 | other | upstream | 1546209 | 68331871 ~ 68352828 (-) |
G432310 | LOC106613894 | other | upstream | 1905826 | 68699821 ~ 68707448 (-) |
G432338 | NA | other | upstream | 1956222 | 68748558 ~ 68755057 (-) |
G432513 | NA | other | upstream | 2210624 | 69004619 ~ 69006106 (-) |