trnag-gcc-13


Basic Information

Item Value
gene id trnag-gcc-13
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66865584 ~ 66865654 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-gcc-13
GCATTggtggttcagtggtagaattctcgcctgccacgcgggaggcccgggttcgattcccggccaatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-gcc-13 True 71 mRNA 0.61 1 66865584 66865654

Neighbor

gene id symbol gene type direction distance location
trnag-gcc-12 NA coding upstream 14344 66851170 ~ 66851240 (+)
trnav-aac-7 NA coding upstream 14964 66850548 ~ 66850620 (+)
trnag-gcc-11 NA coding upstream 16512 66849002 ~ 66849072 (+)
trnag-gcc-10 NA coding upstream 22215 66843299 ~ 66843369 (+)
pak2b pak2 coding upstream 26317 66812879 ~ 66839267 (+)
trnav-aac-8 NA coding downstream 3924 66869578 ~ 66869650 (+)
trnav-aac-9 NA coding downstream 8235 66873889 ~ 66873961 (+)
rpp21 rp21 coding downstream 16340 66840697 ~ 66884634 (+)
gpc5b LOC106613866 coding downstream 25554 66891208 ~ 66987322 (+)
LOC110524403 LOC106613871 coding downstream 137503 67003157 ~ 67057676 (+)
LOC110524392 LOC106613859 non-coding upstream 80068 66776818 ~ 66785521 (+)
G429028 NA non-coding upstream 112131 66753235 ~ 66753453 (+)
G429001 NA non-coding upstream 157806 66707547 ~ 66707778 (+)
G428992 NA non-coding upstream 167585 66671245 ~ 66697999 (+)
G428857 NA non-coding upstream 207555 66656735 ~ 66658029 (+)
G429102 NA non-coding downstream 20529 66886183 ~ 66886424 (+)
G429103 NA non-coding downstream 22006 66887660 ~ 66887884 (+)
G429767 NA non-coding downstream 206137 67071791 ~ 67072079 (+)
G429771 NA non-coding downstream 208021 67073675 ~ 67073875 (+)
G429865 NA non-coding downstream 333943 67199597 ~ 67251340 (+)
G428696 NA other upstream 722979 66142079 ~ 66142605 (+)
G427747 NA other upstream 1344204 65453856 ~ 65521380 (+)
LOC110524338 LOC106584398 other upstream 1836882 65024444 ~ 65028828 (+)
G427476 NA other upstream 1868446 64992101 ~ 64997138 (+)
LOC110522985 NA other upstream 2621055 64243153 ~ 64244790 (+)
G429156 NA other downstream 116295 66981949 ~ 67048164 (+)
LOC110524407 LOC106613876 other downstream 595075 67458540 ~ 67464323 (+)
G430796 LOC106613888 other downstream 1237525 68103179 ~ 68103534 (+)
LOC110524423 LOC106613476 other downstream 1347062 68212224 ~ 68214236 (+)
G434653 NA other downstream 4093956 70959610 ~ 70959932 (+)

Expression


Co-expression Network