aqp12 (LOC106613865)


Basic Information

Item Value
gene id aqp12
gene name LOC106613865
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66883689 ~ 66885402 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021603999.2
ACAATCACACAGACAGCAAACTGAGCAACAAGTCATACATTGTGTGAGCAGAACCAGCAAGGTGTAGTATCATCAGTGAACCTAACTATGTCTGGACTCAATGTCTCCCTTGCTTACTTTCTCGCTGTTGTGGTGTTTGGTGCAGCCTTTAGAAGCCTTTTCAGAAAATGGCCTCGTTTGAGTGTTGCAGCAGAGTTTCCGGCCTCGTATGTGCTGGTGGCATGCTGGCTGGAGGTGCAGACCATTAAAGAGGTGGGCGAGTGGGCAGGAGGACTGGGTCCGGACGTGACTCTAACCATACTGTTTTTAGTGCTGCTTACCCATGGTGTGATCTGTGCCGGAGCCACCGGAAACCCTTCCCTGACTCTGATGAATTTCCTGCTGCTGGAGACCCCTACTCTGCACACTCTGCTGGCTCTGGTTGCTCAGTTCCTGGGGGCACACCTGGCTCTGCTTGGGGCTGGCTACTACTGGGCCCTGGAGCTTAACGACATGCACATGATCAAGAACCTGATGTCAAGGGAGTGCAGCACAGCCCTGCGTGTCTCCCTGGTGCAGGGGGTcttttctgagtgtgtgtgtgcattcatctTTTATCTGATATACCTCAGCCTGAAACGTCGCTCTGCGCTGATTCGGGTTCCTCTTGTTGCAGCTGTGCTCACCTTCTTCTCCCATTCAGCCAGTGATTATACCATGGCTTTCCTGAACCCCTCCCTGGCCTATGGCCTTACCTTCTACTGTCCCGGGTTCACCTTTACGGAGTACTCAGTGGTCTACTGGCTTGGGCCCATTTTTGGAATGACCCTTGCCCTTCTCCTGTACATGGGCCACATTCCCAGGATTTTTACCAAGAACCTGCTGTATTCCCAGAAAACCCACTTCCAGGtgccaaagggggagggagaTAAAAAAAAGTGAAAGAATATAAAAATCATCCACCTCAGCCTAGGCAATAACAGACCTAGAATGCATTAGGAATGCAATGCTCAATTTTGTTCTTATTGGGATGTTTCATTATGCACTGAGCACTATATTCAACAGCTGATTCTCTCCTTAGGTTAAACTGACAAAAAGGGGTGGGCTATAGAATAATAAGATCTGTACATGTATGATACAATTTTATATCTCATGTAAAACCTGTGTTCTTTCAGAAGTAATACATCAATTGAAAATAACTATTTTAAATAAACATGTGTATTAAACATTTAACATTGGTTGTCGTTCCTGAACTTACTGTACATTGTGAACAAGTTGAGGTATACACAACTCAAtccatacatttttggggggcattTTTACCAACCTCAACCAATTACAACTATAATCCATTACCGAAATACCACTGATGTAATGCTAATAGGTTGTCACCAGCAAAAAAaacacagcaaaaaaaaagaaaatatgcTCATataaa
>TU486663
TGTTTTCTTTATGTTATATCTGTGCGtcagaaaaaaaatctgtttttgcagATGATCGCTGCATTAATAAATTAATGATCGGAGAACTCATCTTCTTTGTATTTCAGCCAGTGATTATACCATGGCTTTCCTGAACCCCTCCCTGGCCTATGGCCTTACCTTCTACTGTCCCGGGTTCACCTTTACGGAGTACTCAGTGGTCTACTGGCTTGGGCCCATTTTTGGAATGACCCTTGCCCTTCTCCTGTACATGGGCCACATTCCCAGGATTTTTACCAAGAACCTGCTGTATTCCCAGAAAACCCACTTCCAGGtgccaaagggggagggagaTAAAAAAAAGTGAAAGAATATAAAAATCATCCACCTCAGCCTAGGCAATAACAGACCTAGAATGCATTAGGAATGCAATGCTCAATTTTGTTCTTATTGGGATGTTTCATTATGCACTGAGCACTATATTCAACAGCTGATTCTCTCCTTAGGTTAAACTGACAAAAAGGGGTGGGCTATAGAATAATAAGATCTGTACATGTATGATACAATTTTATATCTCATGTAAAACCTGTGTTCTTTCAGAAGTAATACATCAATTGAAAATAACTATTTTAAATAAACA

Function

NR:

description
aquaporin-12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021603999.2 False 1417 mRNA 0.45 3 66883689 66885402
TU486663 True 619 lncRNA 0.39 2 66883912 66884643

Neighbor

gene id symbol gene type direction distance location
cep19 cep19 coding downstream 81965 66799628 ~ 66801724 (-)
LOC110524398 LOC106613863 coding downstream 89694 66786837 ~ 66793995 (-)
LOC118964717 LOC106584253 coding downstream 119189 66752126 ~ 66764500 (-)
LOC110524390 LOC106613856 coding downstream 146940 66720762 ~ 66736749 (-)
LOC110524389 LOC106584359 coding downstream 206980 66666537 ~ 66676709 (-)
ankmy1 ankmy1 coding upstream 170257 66978887 ~ 67068645 (-)
LOC118936331 dnajc19 coding upstream 626050 67511452 ~ 67513347 (-)
lrrc7 LOC106613881 coding upstream 925193 67810595 ~ 67983549 (-)
si:ch211-198n5.11 LOC106613885 coding upstream 1116683 68002085 ~ 68009594 (-)
LOC110524417 LOC106613888 coding upstream 1167506 68052730 ~ 68114236 (-)
G429620 NA non-coding downstream 1385 66882042 ~ 66882304 (-)
G429617 NA non-coding downstream 44456 66838176 ~ 66839233 (-)
G429580 NA non-coding downstream 70931 66810013 ~ 66812758 (-)
G429583 NA non-coding downstream 98199 66784937 ~ 66785490 (-)
G429599 NA non-coding downstream 115793 66767693 ~ 66767896 (-)
G430255 NA non-coding upstream 526495 67411897 ~ 67412183 (-)
G430261 NA non-coding upstream 532327 67417729 ~ 67418525 (-)
G430295 NA non-coding upstream 554809 67440211 ~ 67440425 (-)
G430416 NA non-coding upstream 565019 67450421 ~ 67451255 (-)
G428132 NA other downstream 1501099 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 1872091 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 1972691 64903039 ~ 64911196 (-)
LOC110524330 LOC106613802 other downstream 2150717 64701867 ~ 64810664 (-)
bend5 LOC106584333 other upstream 1454802 68331871 ~ 68352828 (-)
G432310 LOC106613894 other upstream 1814419 68699821 ~ 68707448 (-)
G432338 NA other upstream 1864815 68748558 ~ 68755057 (-)
G432513 NA other upstream 2119217 69004619 ~ 69006106 (-)

Expression


Co-expression Network