Item | Value |
---|---|
gene id | lrrc7 |
gene name | LOC106613881 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 67810595 ~ 67983549 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
leucine-rich repeat-containing protein 7-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036978165.1 | False | 7803 | mRNA | 0.46 | 28 | 67810595 | 67911677 |
XM_036978166.1 | False | 7785 | mRNA | 0.46 | 27 | 67810595 | 67911677 |
XM_036978170.1 | False | 7716 | mRNA | 0.46 | 27 | 67810595 | 67911677 |
XM_036978168.1 | False | 7765 | mRNA | 0.46 | 28 | 67810595 | 67911678 |
XM_036978172.1 | False | 7651 | mRNA | 0.46 | 27 | 67810595 | 67911678 |
XM_036978175.1 | False | 7747 | mRNA | 0.46 | 27 | 67810595 | 67911678 |
XM_036978174.1 | False | 7613 | mRNA | 0.46 | 27 | 67810595 | 67911679 |
XM_036978176.1 | False | 7595 | mRNA | 0.46 | 26 | 67810595 | 67911679 |
XM_036978167.1 | False | 7721 | mRNA | 0.47 | 29 | 67810595 | 67983549 |
XM_036978173.1 | False | 5545 | mRNA | 0.53 | 28 | 67812837 | 67911678 |
XM_036978169.1 | False | 6559 | mRNA | 0.51 | 28 | 67812847 | 67911679 |
XR_005051841.1 | False | 6084 | mRNA | 0.51 | 28 | 67812965 | 67911679 |
XR_005051843.1 | False | 5487 | mRNA | 0.53 | 29 | 67813020 | 67911679 |
XR_005051842.1 | False | 6030 | mRNA | 0.51 | 28 | 67814025 | 67911679 |
XM_036978171.1 | False | 6078 | mRNA | 0.51 | 27 | 67814219 | 67911679 |
TU488974 | False | 2969 | TUCP | 0.36 | 4 | 67810605 | 67816544 |
TU488969 | True | 3947 | TUCP | 0.41 | 4 | 67811486 | 67818124 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118936331 | dnajc19 | coding | downstream | 297248 | 67511452 ~ 67513347 (-) |
ankmy1 | ankmy1 | coding | downstream | 741950 | 66978887 ~ 67068645 (-) |
aqp12 | LOC106613865 | coding | downstream | 925193 | 66883689 ~ 66885402 (-) |
cep19 | cep19 | coding | downstream | 1008871 | 66799628 ~ 66801724 (-) |
LOC110524398 | LOC106613863 | coding | downstream | 1016600 | 66786837 ~ 66793995 (-) |
si:ch211-198n5.11 | LOC106613885 | coding | upstream | 18536 | 68002085 ~ 68009594 (-) |
LOC110524417 | LOC106613888 | coding | upstream | 69359 | 68052730 ~ 68114236 (-) |
slc5a9 | slc5a9 | coding | upstream | 200677 | 68184226 ~ 68190916 (-) |
spata6 | spata6 | coding | upstream | 231451 | 68215000 ~ 68231509 (-) |
agbl4 | LOC100286605 | coding | upstream | 250572 | 68234121 ~ 68643132 (-) |
G430434 | NA | non-coding | downstream | 290070 | 67478719 ~ 67520525 (-) |
G430438 | fxr1 | non-coding | downstream | 302264 | 67507729 ~ 67508331 (-) |
G430416 | NA | non-coding | downstream | 359340 | 67450421 ~ 67451255 (-) |
G430295 | NA | non-coding | downstream | 370170 | 67440211 ~ 67440425 (-) |
G430261 | NA | non-coding | downstream | 392070 | 67417729 ~ 67418525 (-) |
G431882 | NA | non-coding | upstream | 81348 | 68064897 ~ 68065317 (-) |
G431896 | NA | non-coding | upstream | 95116 | 68078665 ~ 68078940 (-) |
G431902 | NA | non-coding | upstream | 100242 | 68083791 ~ 68084003 (-) |
G431910 | NA | non-coding | upstream | 106668 | 68090217 ~ 68090511 (-) |
G428132 | NA | other | downstream | 2428005 | 65370116 ~ 65382590 (-) |
G427902 | ubxn6 | other | downstream | 2798997 | 64999708 ~ 65011598 (-) |
LOC110524332 | LOC106613803 | other | downstream | 2899597 | 64903039 ~ 64911196 (-) |
LOC110524330 | LOC106613802 | other | downstream | 3077623 | 64701867 ~ 64810664 (-) |
bend5 | LOC106584333 | other | upstream | 356655 | 68331871 ~ 68352828 (-) |
G432310 | LOC106613894 | other | upstream | 716272 | 68699821 ~ 68707448 (-) |
G432338 | NA | other | upstream | 766668 | 68748558 ~ 68755057 (-) |
G432513 | NA | other | upstream | 1021070 | 69004619 ~ 69006106 (-) |
G433683 | LOC106613912 | other | upstream | 1539265 | 69486406 ~ 69524790 (-) |
G431744 | NA | non-coding | upstream | 25710 | 67843834 ~ 67844801 (-) |