slc5a9 (slc5a9)


Basic Information

Item Value
gene id slc5a9
gene name slc5a9
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 68184226 ~ 68190916 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604024.2
ATAAGCTGATTAATTATTGACTTGCTTCATGCTAGCCTCAAAGTTCACAcggttttctatgtttttgtcaAAATGACTTCAACACCTAGTCTTGCGACAACGACTTCTGTGCCTGAATTACCTGAAAAGTTTGCTTTGGAAGCTCTTGATATTGTTGTGGTCGTGGTATActttgtctttgttcttgttgTGGGAATATGGTCTTCTGTCAGGGCAAACCGTGGGACAGTGGGTGGATACTTCTTGGCTGGAAGATCCATGACATGGTGGCCTATTGGGGCCTCTCTGATGTCCAGTAATGTTGGCAGTGGTTTGTTCATTGGACTAGCTGGCACTGGAGCAGCAGGAGGCATCGCTGTTGGAGGGTTTGAATGGAATGCAGCTTGGGTCCTCATTGCTCTTGGTTGGATCTTTGTGCCTGTTTACATATCTGCTGGTGTGGTAACTATGCCAGAGTACCTGAAGAAGCGGTTTGGGGGCCAGCGCATCAGAATCTACATGAGtgttctctccctcatcctctatATTTTCACCAAGATATCAacagacatcttcTCTGGCGCTCTGTTCATTCAAGTGTCCCTGGGCTGGGACCTCTATCTCTCCACAGTGGTGCTTCTTCTAGTAACTGCCCTCTACACTATAGCTGGGGGGCTGACAGCAGTTATCTATACAGATGCTTTACAGACGGTCATCATGGTGATAGGCGCATTCGTACTCATGTTCATAGCGTTTGACAAAGTGGGTTGGTATGAGGGTCTGCTGGAGCAGTACAAGGAGGCCATCCCCACATTGACTGTGCCCAACACTACATGTCACCTACCCCGGTCCGATGCCTTCCACATCCTCAGAGACCCAGTGACGGGGGATCTGCCCTGGCCTGGTCTGCTGTTTGGCCTCACGGTGATAGCCACCTGGGTGTGGTGCGCTGACCAGGTGACAGTGCAGAGGTCTCTCTCAGCCAAGAACCTGTCCCATGCCAAAGGAGGCTCTGTGCTGGGAGCTTACCTGAAGGTCCTGCCCATGTTCTTTATAGTGATGCCTGGAATGATCAGCAGAGCACTTTACCCAAATGAGGTAGGATGTGTTGACCCCATTGCGTGCCAAAGAATCTGTGGAGCCACCGTGGGCTGCTCCAATATTGCCTACCCAAAACTAGTGGTAGAACTTATGCCTGTTGGCATGCGGGGGTTGATGATTGCAGTAATGATGGCTGCCCTCATGTCCTCTCTGACCTCCATCTTCAACAGCAGCTGCACCCTGTTCACCATGGACATCTGGCAGAGGGTCCGGCCACAGGCCTCCGAGCCAGAACTCATGGTAGTGGGCAGGGTGTTCATCTTAGTAATGGTGGTGCTCAGCATTCTGTGGATCCCCATCATCCAGTCAGCCAACAGTGGACAGCTGTTTGACTACATCCAGGCCATCACCAGCTACCTGGCTCCTCCCATCACTGCTGTCTTCATCATGGCCATATTCTGGAGGCGTGTCAATGAGCAGGGAGCCTTCTGGGGTCTGATCGTGGGCCTTGCTGTTGGCTTGGTGCAGATGGTGCTGGTGTTTGTGTATGGCACCCCATCTTGTGGAGAGATAGACATACGGCCAGCCTTCATCAGGGATGTCCACTACCTGTACTTTGCTCTTATCCTCCTGGCTCTCACTGGCCTGGTCATCACTGCTGTCAGCCTCTGCACTCCGGCCATTCCAGAGCACCATCTCCATCGCCTGACATGGTGGACAAGACACAGCAAGGAGCCGCGCATTGACTTCAATGACCCATGGACCACAAAGCCCAGGACACCACCCAGAACTCCTGACCCCAGAGTTGGGGAGGAGGCTGTTGTGGAGGGCGGGCCATGCTGGAAGCGTACTGGAATGTGGCTGTGTGGGCTGTCTGGGCCTGAGAAGAAAAAGTTAACCCTGGAGGAGAAAAATGCCTTGGAGTTAAAACTGACCAACATTGAGGAAGAACCAATCTGGCGGAACGTGTGCAATGCGAACGCCCTCATACTACTCTCTATCAATGTCTTTATGTGGGGCTACTTTGCCTGAGTTAATATAACTCTCATTTTGATTATAGATATTGTTGAATCACATATTGTTTATTGAATTAGTGATCACACACAAAATGCTAATTGGTTTACAATTAGAATGTCAAACAATAATGGTAATGTTGTTTTTAGTTGTTGGGATTTAGACTTTTTATTGCCAAAACTGTCATCTGTATGTGTACTCTTTGATCAGGGTCAGTAGTTAGGTTTCCATCCatttggcgacagattttcatgcgaatattcaaaaatccgcataaaaacaatatgcacattttcctaCCATAGATGCGTTCCCATCAAATGGACTTGTTacagataaaaggctgtgcgtgtTGATGTATTGGACATAAAATAccttttgcggttaaattccccatgtactgaataaaaaatgcaagttaaatgggtttccattgcattttcaactctactggaaaaaatgtcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttc

Function

symbol description
slc5a9 Predicted to enable glucose:sodium symporter activity. Predicted to be involved in sodium ion transport. Predicted to act upstream of or within ion transport and transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC5A9 (solute carrier family 5 member 9).

NR:

description
PREDICTED: sodium/glucose cotransporter 4

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K14389 SLC5A9, SGLT4; solute carrier family 5 (sodium/glucose cotransporter), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604024.2 True 2672 mRNA 0.48 13 68184226 68190916

Neighbor

gene id symbol gene type direction distance location
LOC110524417 LOC106613888 coding downstream 69990 68052730 ~ 68114236 (-)
si:ch211-198n5.11 LOC106613885 coding downstream 174632 68002085 ~ 68009594 (-)
lrrc7 LOC106613881 coding downstream 200677 67810595 ~ 67983549 (-)
LOC118936331 dnajc19 coding downstream 670879 67511452 ~ 67513347 (-)
ankmy1 ankmy1 coding downstream 1115581 66978887 ~ 67068645 (-)
spata6 spata6 coding upstream 24084 68215000 ~ 68231509 (-)
agbl4 LOC100286605 coding upstream 43205 68234121 ~ 68643132 (-)
bend5 LOC106584333 coding upstream 140955 68331871 ~ 68352828 (-)
LOC110524428 LOC106613895 coding upstream 625046 68815962 ~ 68819009 (-)
faf1 LOC106613896 coding upstream 639499 68830415 ~ 68911632 (-)
G431968 NA non-coding downstream 15151 68168805 ~ 68169075 (-)
G431967 NA non-coding downstream 15559 68168428 ~ 68168667 (-)
G431963 NA non-coding downstream 21746 68162235 ~ 68162480 (-)
G431962 NA non-coding downstream 22173 68161844 ~ 68162053 (-)
G431958 NA non-coding downstream 27095 68156931 ~ 68157131 (-)
G432084 NA non-coding upstream 154238 68345154 ~ 68383762 (-)
G432338 NA non-coding upstream 557642 68748558 ~ 68755057 (-)
G432377 NA non-coding upstream 615098 68806014 ~ 68806320 (-)
G432389 NA non-coding upstream 636058 68826974 ~ 68827650 (-)
LOC110522990 LOC106613902 non-coding upstream 859917 69050540 ~ 69054216 (-)
LOC110524398 LOC106613863 other downstream 1394390 66786837 ~ 66793995 (-)
G428132 NA other downstream 2801636 65370116 ~ 65382590 (-)
G427902 ubxn6 other downstream 3172628 64999708 ~ 65011598 (-)
LOC110524332 LOC106613803 other downstream 3273228 64903039 ~ 64911196 (-)
G432310 LOC106613894 other upstream 508905 68699821 ~ 68707448 (-)
G432513 NA other upstream 813703 69004619 ~ 69006106 (-)
G433683 LOC106613912 other upstream 1331898 69486406 ~ 69524790 (-)

Expression


Co-expression Network