Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110524457 |
| gene name | LOC106584309 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 69825310 ~ 69834151 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036978256.1 | False | 3213 | mRNA | 0.46 | 2 | 69825310 | 69833853 |
| XM_021604111.2 | True | 3298 | mRNA | 0.46 | 2 | 69825310 | 69834151 |
69,824,000
69,826,000
69,828,000
69,830,000
69,832,000
69,834,000
69,836,000
69,838,000
69,840,000
69,842,000
69,844,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524454 | rfc4 | coding | downstream | 73862 | 69744586 ~ 69751448 (-) |
| LOC110524451 | LOC106613917 | coding | downstream | 81956 | 69738363 ~ 69743354 (-) |
| LOC110524450 | k0841 | coding | downstream | 96884 | 69715282 ~ 69728426 (-) |
| LOC110524449 | LOC106613916 | coding | downstream | 110980 | 69704871 ~ 69714330 (-) |
| LOC110524447 | LOC106613914 | coding | downstream | 206235 | 69551803 ~ 69619075 (-) |
| LOC110522884 | LOC106604339 | coding | upstream | 86006 | 69920157 ~ 69921094 (-) |
| LOC110524459 | spata16 | coding | upstream | 116053 | 69950204 ~ 70004717 (-) |
| LOC110524463 | tbl1xr1 | coding | upstream | 1002664 | 70836815 ~ 70870397 (-) |
| LOC110524467 | zmat3 | coding | upstream | 1187521 | 71021672 ~ 71033577 (-) |
| LOC110524468 | LOC106613935 | coding | upstream | 1211891 | 71046042 ~ 71057781 (-) |
| G433820 | NA | non-coding | downstream | 87901 | 69736944 ~ 69737409 (-) |
| G433818 | NA | non-coding | downstream | 92145 | 69732955 ~ 69733165 (-) |
| G433814 | NA | non-coding | downstream | 95518 | 69729555 ~ 69729792 (-) |
| G433735 | NA | non-coding | downstream | 122019 | 69656009 ~ 69703291 (-) |
| G433725 | NA | non-coding | downstream | 268819 | 69555019 ~ 69556491 (-) |
| G433889 | NA | non-coding | upstream | 33182 | 69867333 ~ 69886159 (-) |
| G433918 | ect2 | non-coding | upstream | 63778 | 69897929 ~ 69899326 (-) |
| G433938 | NA | non-coding | upstream | 90510 | 69924661 ~ 69924861 (-) |
| G433940 | NA | non-coding | upstream | 92993 | 69927144 ~ 69991777 (-) |
| G433950 | NA | non-coding | upstream | 105443 | 69939594 ~ 69965405 (-) |
| G433683 | LOC106613912 | other | downstream | 300520 | 69486406 ~ 69524790 (-) |
| G432513 | NA | other | downstream | 819204 | 69004619 ~ 69006106 (-) |
| G432338 | NA | other | downstream | 1070253 | 68748558 ~ 68755057 (-) |
| G432310 | LOC106613894 | other | downstream | 1117862 | 68699821 ~ 68707448 (-) |
| bend5 | LOC106584333 | other | downstream | 1472565 | 68331871 ~ 68352828 (-) |
| G435234 | NA | other | upstream | 1156741 | 70990892 ~ 70991798 (-) |
| G435176 | NA | other | upstream | 1233874 | 71068025 ~ 71068887 (-) |
| LOC110524478 | LOC106613944 | other | upstream | 1395031 | 71226012 ~ 71242283 (-) |
| il23r | LOC106613945 | other | upstream | 1452239 | 71285725 ~ 71308015 (-) |
| G436172 | LOC100136696 | other | upstream | 2206811 | 72040962 ~ 72121697 (-) |
