LOC110524461 (naaladl2)


Basic Information

Item Value
gene id LOC110524461
gene name naaladl2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 70455465 ~ 70738345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604123.2
GCCTTTCTAGTGTTACAGCTTGGTCGGGAGGACGGCAGTTACATGGGAGCCTATTAGATAACCTATTTCCCTGTCCCTGGACTCACACAAACAGGGAATGAACAATGGGAGACACACATGGATATTCTAGCGACCCAGCCCTGCAAGGTCTTGAAGGCATGGCGTACAGGAAGGTGCGTGCGGCCCACACAGGGTCTCTGGAGCGGGAGGAACTGCAGGCATCCGCCCTGGACCTGGAGTGGGATATGGAAAAGGAGCTACAGGACCCGGGACTAGGCCTGGACCGCTTCCAGCTGGAGTGTGTGGAGCATCGGACCGTGGGCAACTCCAACCGTGCTGATCCAGACCCAGACCTGGAGCCCATCCAGCCCTCTGTGTCCGTCTCGCCACACGGTAGGTTTGAGCGGCTGCAGGAGGACCCCAACTACATCTCCCACTTCACCAGGGCTCCACCCAAGGGCCAGCGGAGAAGCAGCTGCAGCCTGGTCAAGTACCTGCTAGCAGGTGTAGGGCTCTTTATCCTGGGGCTACTGATAGGCCACTACGCCCACAGCACGGACAAGCCCACCCCTGAACCCCCCACTGACACAGACCTCCTGGAGGAGCTGCTGAGGGACATCACAGCTGAGAAGATCCAGGCTCTGCACAGGCCTTTCATTAGCATATCAGACGACAACGAGGAGGCCAGGGCTAAGCACCTGTACCAACAGTGGACAGACCTGGGATTGACAGACGTCCAGCTGTCCAATTACAGCGTCCTCCTCAGCCTGCCTGGCCCCTCCTCCAGCAGAATTGTGGACCGGGCCAGCCACGAGTGTTTCCTGCCCAGCGGGGCTCAGTGTGACCCCAggaaccacaacaacaaccccaCGGCAGACCAACACTTCTCCTACGCTGCCTACTCTGCCACGGGCAGTCTAGAGGCGGTAGTAGTGGATGTGCAGTATGGAGGTTTGGAGGACATGAGAAGAGCCAGAACTACAATGAATGTCACCAACCAGATTGCACTATTAAAACTGGGACAAGCACCCTTACTTTACAAGATTTCCTTCCTGGCAGAGATGGGTTTCGGGGGTGTACTCCTCTACATGGACCCTTGTGACGGCCCCCGTGACCAGAGTCTGTGGCACAAAGCATTTGGGGTCACCCTGAATCCTGGGGGAGACCCCTCCACCCCTGGATACCCCAGTATTGTGGGGAGTTACAGGGAGGAGTGGCCCAACCTGACGTCTCTGCTGGTCCAGCCAATCTCTGCCTCCCTAGCCAAAAGGCTGCTCAACATCCAGTCTGTGGGACTGGGAAGTCCCTGTACTCCTCTGGCCATGCCTGCTGCCTCAGagaggaggaagatacAACTAACTATTGGGACCCACTCAATATACAAGACAGTAAACAATGTGTGTGGATACTTGAGAGGAAAGACCAATCCAGATCGATATGTGCTGGTGGGCAGTCGCCATGACAGCTGGCATAAAGGGACAGCAGCTGATTGGCGCGGCGGCTCTGCCATGATGACTCAGATCATCACCTCGGTGACCAAGCAGGCCCGGAGAGGCTGGGAACCCGACCGCACCACTGTCTTCTGCTCATGGGGGGGATCAGCGCTCGGCAACATCGGCTCCTTTGAGTGGGGAGAGGAGAACCGGGTGGTGCTGCAGAGCAGGGCTGTAGCCTACGTCAGCCTCCACAGTCCTGTCAGGGGGACGGAGACCCTGCGCTCCACTGCCTCTCCCTCACTGCTCCAACTCACCTCAGACATCCAGAAGAGGCAGCTGCTGAGCTGTATTCGAGGTGGAAGCTGCCCTGGACCAAATGTCAGCTCCCTACAGATCCCTGGGGACGTCAGCTTCTTTGCCAACCACCTCGCTGTCCCTACTATGGAGTTTGCATTTGAACAGACCAAAGCAGAAGAGAAAAGCAGTTTTCTCTCTGAAGCCCTGTTTTCTGCAGAGTCACCAGAGACCTTGGATCCCCTCTTCAAATTCCATGAGACTATCGCTAAGATGACAGCAGAGGTCATTCTTCGACTCGTCAATGATCCAGTACTTCCATTCTATCCTCTTGATATCGCCCTGGATGTCCAGGATAAACTCAAAGATGATCCCCTGAGGACCCCCAGACTGCTGGCAGCAGCTGCCTCCCTCAGAGAGAGCTCAGCCTTCCTCCAGTCTGAGACCATGCGTCCAGCCAATGACCCCAAGGAGAGGGACCCCTCCCATGTCCGCATGCTGAACGACGTGCTCCGGGACCTAGAGAAGAGCTTCATGGTCCCCCAGCCCCCTCCAGGTGTCTACAGGAACCTGTTATACAGTCTGAATGGGAAGGTCCCCCAGTTCTCCATACTGAAGTACCCCCTGGATCCACTAAAACACAACGCTGTAAACAAGTCTCTGTCACTGATAATAAACGCCATCAATTCAGCTGAAAAACTCATTCGCTGTGGGCTTGACCTCTTTGAAAACAGTCCAGATGACACAAATTGACCCAACGAATCCAATCAGCCAAGGTTAGAGGCACTGTATGGCTGCACTGCCTAGACCAATGGTATCTGCATACGTGCCTCAGATACCTAAGTTCACTCTGCACAATGAAGTgtggcacttttttttttttttacaaagagaTCACACTAAAGCAATATGAAGAGACCGGGACCCCTTCTTGCACTACTCTTCTTGAGCGCCTACTGTGTTCAGGTTTACGAAACGTTCAATAAGCAATGTTGATTTCTTCTAGATCCTTCTGGCTGTCAATGAAAGTGCTGGGCTATCCAAGATGTCCTAATGCCTCATTTATacatgtctgtctggctgtctggaaCAACGCCAGACAGGCAGGCACGTATAAACTGAGAACGTGAAGAaacactggaacacaggagtgagctAAATCTACAAGACAGAGTGATTCACAACCACGCAGAGCTTGATAGATAAACATGCATTTTGAAGTGAGTAATGCGTCACTGACTACAGCATGTTTTTACACGAGTGGATAAACACTATAAGGCCAGCTGGATGTGTTTATGCTCATATGCCCTATTGAGCAATCTCTGCCTCTGTCTAAAcattcaaacaaaacatacagtatgacACCATTCCATGCTCTTAGTTCTGCTGAAAGCACAACAACCCTCTGTTCTGCTCTCATTGTGCCTTGTGATTTTCTACAGGCAAGGCAAATGTGTATCTATGACAGAGCAGAGGAGAACATGATGTTTGGATTATAGTAAGTGTGTGAGAAATTAGCTATATTTACAGAGGCATGATTGGTGAGGTGAACAGTGACAGTGGTGTGACATGGCCTGTTTTGACAGTTGACATGCTCAACCGTACTTCTTATACTAGTCATACGCATTACCGTCTTGACTGCAGACCCAAGCTGGCTTTAAGGATgcttaaatttgatttgatttgaagtcccTGAAAACTGCATTTTGTATGATTCTATTTTTCAGTGTCTCATGCACCATATGATTGAATCCAATAACCAGCACAGTAAAGTGCTCTCTACCAGATGTGTGCTTTGAttggatgttttttttcttctactttGATGTATTGAAAAATAATAATTCATCTTTGATAATGTCTCGCACCCAAAGTGAAATGTGATATCCGTATTTTTCTAATAACTGTGAATTACTTGGAGTCCTCCAATGATCAATGTTATTAAAAACAGGCAAGTCTCTGCAATACTTTGATATAGAAGCAATGGCAATACCAACGGACAAGAGTAGTGTGGTTGTCGACAAAACAAACCTCACTTTCCCTATTTGTACATACAGTAAGGATGAAATATGTAGTATTACAGTAGCTGTTATTTGACTTAACTTATTTGTTATGCTTTGTTCATGGTAGACTTCATGTGTTATTTTTGCATGAGCGTTGACATTCATTGGGATGAATCTTGTCTGAGGCAGCGCTGAGCGATTTCCACTACAAGGGCTTGAGGCAAAGTCAAGATTGTCTATATTATATCGTACAAATgattatagttttttttaaatcactttttggtcttcatttaaggctagggttaggcataaggttagcagtgtggttagggttatgttttAAATCAGATTTGATTAcattgtggctgtgccagctagtgactacccttcagagctgcctccagtacaTCAATCATACCAATAAATGACAACCTGCATATTGCAATTTACGTCATTtgttttgcttattttttttaggGTTTAAGTGATATTTTCTTAATTGCAGGGTTATGTAATGCTGTTGTGTCCATCTCAAGGATAAATGTTGATTTTGAAGGTAGTGGAACTGTCTCCAAAAGTCTCCTATGCCAATAGGAGTAATCAATTACAATTAGTAATCCTTTGTCCATCATCATTATTGTCATCATTATAAGACATTTGCACTAGTGATTGTGTTTTTGATAACGTTTTTACAAATTTGTGATATAAAGGTCACTGGAATTCATAATAAGGATTTAATGATATTTTGTTAAAGAAATTGTACTTGACTTAACTTTTTAAAAGAAATGGAATGGCTATTTAGGAACACTTCATTCAGGGACTACAATATTAGCTAAGCTTTAAATGATGTACGTGCCTTTATTTGAAAATCATGAATGCTTTAAGAAAGGTTCTTCGGCTGATGTCAATAGTACATGTGTACATTGTTATTTTGCTTGAATTGAGGAATCTGTTTGATTTCGATACCAAAAATGAAGTGTGTGCTGTATAAAACCCTATTAGTTTAGGATTAATTCAACAACAGTAGGCCTACTACATTTTTAGTGGCatgaaaaaaataataagaaaTTATAAAAAGCCAGTTGTCTCATTCCTTCAAATTGGTCAATTAATAATCTTCTTCGGACTTCTTCGGAGGACCATTACATAACTTTATTACAggatttttattaatttattttatcATTAAGAAGTTGACATTGTTCATGCATAGTAGCATATAAAATGCCCTTTATAACAGGTGAACAGGTGAATGTTTTTTTGTTACATAAACAAAGGTTTTATAAGGCAACAGCAACAAGCCTTTGGTATGAGTTATCTGGAAGCATGGTAAGTAAGGAAGTAGTTCCATCATTCactgtagtatgtagtatgaaaTGGCAGATTGTTATGCTCTTACTGTACCTCCGAATATAGTAGCTTTTAGTTGGACCATGAGCTTCAAATAGGCTATATCAAATGTCTTCAATTGTACAGTTATTTATGTGATGCTTTGTACAATCATATAATATTACACAAGCTAGATGTGTTGCATGATGTGTTACATGAAATACTGCATTGACTTGCATGAATATTGCATGTATTTGCACTAAGCATCTTGATTGTGAGTTTACCCAGTCTTATATTGTTGTAAATTGTGATCATGTCTTTAGTCTCTTAAGTAATAGGTATCAGGGTTTTGGCCACTTGAAATTCCTTTGGGATTTGTTTCTTTAAATGTATCTTAATATAGCTGGTCAAGCAGGAACTATCATGTATTGAATCCCCATGTCATTGGTATCATATGCAATAAATGCTACATTGGCATGA
>TU490792
TATTTAGGAACACTTCATTCAGGGACTACAATATTAGCTAAGCTTTAAATGATGTACGTGCCTTTATTTGAAAATCATGAATGCTTTAAGAAAGGTTCTTCGGCTGATGTCAATAGTACATGTGTACATTGTTATTTTGCTTGAATTGAGGAATCTGTTTGATTTCGATACCAAAAATGAAGTGTGTGCTGTATAAAACCCTATTAGTTTAGGATTAATTCAACAACAGTAGGCCTACTACATTTTTAGTGGCatgaaaaaaataataagaaaTTATAAAAAGCCAGTTGTCTCATTCCTTCAAATTGGTCAATTAATAATCTTCTTCGGACTTCTTCGGAGGACCATTACATAACTTTATTACAggatttttattaatttattttatcATTAAGAAGTTGACATTGTTCATGCATAGTAGCATATAAAATGCCCTTTATAACAGGTGAACAGGTGAATGTTTTTTTGTTACATAAACAAAGGTTTTATAAGGCAACAGCAACAAGCCTTTGGTATGAGTTATCTGGAAGCATGGTAAGTAAGGAAGTAGTTCCATCATTCactgtagtatgtagtatgaaaTGGCAGATTGTTATGCTCTTACTGTACCTCCGAATATAGTAGCTTTTAGTTGGACCATGAGCTTCAAATAGGCTATATCAAATGTCTTCAATTGTACAGTTATTTATGTGATGCTTTGTACAATCATATAATATTACACAAGCTAGATGTGTTGCATGATGTGTTACATGAAATACTGCATTGACTTGCATGAATATTGCATGTATTTGCACTAAGCATCTTGATTGTGAGTTTACCCAGTCTTATATTGTTGTAAATTGTGATCATGTCTTTAGTCTCTTAAGTAATAGGTATCAGGGTTTTGGCCACTTGAAATTCCTTTGGGATTTGTTTCTTTAAATGTATCTTAATATAGCTGGTCAAGCAGGAACTATCATGTATTGAATCCCC

Function

symbol description
naaladl2 Predicted to enable metalloexopeptidase activity. Predicted to be involved in proteolysis. Predicted to act upstream of or within response to bacterium. Located in nucleoplasm.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604123.2 False 5545 mRNA 0.45 14 70455465 70738345
TU490792 True 972 lncRNA 0.33 1 70737332 70738303

Neighbor

gene id symbol gene type direction distance location
nlgn1 nlgn1 coding upstream 107135 70065855 ~ 70348330 (+)
ect2 ect2 coding upstream 547902 69871717 ~ 69907563 (+)
mcf2l2 LOC106613920 coding upstream 586139 69758226 ~ 69869326 (+)
LOC110524452 LOC106613919 coding upstream 710349 69742416 ~ 69745116 (+)
LOC110524448 LOC106613915 coding upstream 752193 69614131 ~ 69703302 (+)
si:ch211-51h4.2 LOC106613927 coding downstream 863 70739208 ~ 70836826 (+)
si:ch211-247n2.1 LOC106613930 coding downstream 243712 70982057 ~ 71012481 (+)
pik3ca pik3ca coding downstream 295675 71034020 ~ 71045983 (+)
lamp3 lamp3 coding downstream 311711 71050056 ~ 71053212 (+)
LOC110524466 LOC106613934 coding downstream 317224 71055569 ~ 71065158 (+)
G433355 NA non-coding upstream 117336 70332364 ~ 70338129 (+)
G433093 NA non-coding upstream 174258 70264126 ~ 70281207 (+)
G433300 NA non-coding upstream 203711 70251510 ~ 70251754 (+)
G433298 NA non-coding upstream 205204 70250008 ~ 70250261 (+)
G433297 NA non-coding upstream 206094 70249127 ~ 70249371 (+)
G434565 NA non-coding downstream 61312 70799657 ~ 70800461 (+)
G434512 NA non-coding downstream 105440 70843785 ~ 70846161 (+)
G434600 NA non-coding downstream 132879 70871224 ~ 70871447 (+)
G434650 NA non-coding downstream 215138 70953483 ~ 70953694 (+)
G434664 NA non-coding downstream 232942 70971287 ~ 70972008 (+)
LOC110524423 LOC106613476 other upstream 2241361 68212224 ~ 68214236 (+)
G430796 LOC106613888 other upstream 2351931 68103179 ~ 68103534 (+)
LOC110524407 LOC106613876 other upstream 2991142 67458540 ~ 67464323 (+)
G429156 NA other upstream 3407301 66981949 ~ 67048164 (+)
G428696 NA other upstream 4312860 66142079 ~ 66142605 (+)
G434653 NA other downstream 221265 70959610 ~ 70959932 (+)
G434792 LOC106613943 other downstream 480444 71218789 ~ 71223578 (+)
G434829 NA other downstream 560270 71298615 ~ 71298900 (+)
ralgps2 LOC106613957 other downstream 937526 71552653 ~ 71687963 (+)
G436403 NA other downstream 1765115 72503460 ~ 72504435 (+)

Expression


Co-expression Network