angptl1a (LOC106613958)


Basic Information

Item Value
gene id angptl1a
gene name LOC106613958
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71621173 ~ 71661464 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604207.2
tATGTGAGCAGCTGGGAGAGCTCTGCTCTGCAGGAGAGGTTAGAACGTTCTGTTAGCAGTTCTTTTCTGGGTGCAGAAGAATCTGGGGAGTTTAGCAACGCTGTTTCTCCAGGGGACTGGTATCTAGATCGGTCTAGCTTTACCTTGAGGCTTATGTACAGCGAGACTCTGTACAGTGAGTGAGAAGGACTCCTCAAACAGAGAGCCTGAGACAGACGGGCTGTATGTGGATGTCAAGGGAAGTAGCTACACACAGGAGCTCAGCAACAGAGAAGCCCAGAGGAAGTCCAGGAGTCATCCAGACAGCCAGTAGAAGTACACTATGCAGGTTGTGGTGGGGGTGAAGCAGGGAGTGTCGTGGAGCCTGTGTGCcctgctctgcctctctttcttggAGCAGAGCCAGTGCAGGGGCTCCAGACAGGCTAGAGAAACCAAGGAATATCCCCTGCTCAGGGCCAAACGAACTCCCACAGAAGACGTCAAGAAGTGCTCCTACACCTTTCTGATTCCCCAGCAGAAGATCACAGGCCCCATCTGTGCCAGTGCAACGGGCCCCGAGCCGGACAAGGAGCGTGTGACACGGATGGACATAGCTGACGTAAAAGAGGTGCTGTTCAAGCAGAGAAGGGAGATTGAGACCCTGCAGCTGGTGGTGGACGTGGACGGCAACATGGTGAACGAGATGAagctgctcaggaaggagagcaGGAACATGAACTCCAGGGTGACCCAGCTCTACATGCAGCTGCTTCACGAGATCATCAGGAAGAGAGACAACTCTCTGGAGCTGGCCCAGCTGGAGAACCGGGTTCTCAACGTCACCTCAGAGATGCTGAAGCTAGCCTCCCGCTACAAGGAGCTGGAAGGGCGTTTTGCAGCGATGGCGGGGGTGGTGAACAACCAATCTGTGCTGATCGCTGCGTTGGAGGAGCAGTGTCTGCGGACCCTGGGGCGCAGTGAGATGCAGGTGGTCCCCCCGCTGGTCCAGGTGGTCCCAGAGAACATCCCCGTCAACAGCCGCTTCACCAACGAGATACAGAGGGATCACAACAACCGGGCATTCCCACGGGGGTCACGCATGGACTCCCCCACCGCCTCTCCATTTGGACTCAACCCGCCGCCACCGCAGGGCACGCTCACCTCAGAAGgtCCGTTTAAGGACTGCTACCAGGTGCGCCAGGCGGGCCACAGCACCAGTGGGATGTACCTGCTGAAGGCAGAGAGTAATGAACAGCTGATCCAGGCCTGGTGTGAACACAGCTTAGACAATGGAGGCTGGACCGTGTTACAGAGAAGGAAGGATGGATCGGTCAACTTCTTCAGGAATTGGGAGAACTACAAGAAAGGCTTTGGGAACATAGATGGTGAATACTGGCTGGGTCTGGAGAACATCTTTAACCTGGCAAAGCAGGGGGACTACAGGCTGCTGGTAGAGCTGGAGGACTGGGTGGGGAAGAAGGTGTATGCTGAGTACAGCAGCTTCCGCCTGGAGCCTGAGAGTGAGGGCTACCGCCTGAGACTGGGCACCTACCAGGGAAACGCTGGAGACTCCCTCAGCAGCCACAATGGGAAAATGTTCACCACGCTGGACAGGGACAAGGATGTTTTCTCAGGTAACTGTGCCCACTTCCATAAGGGAGGTTGGTGGTACAACGCCTGTGGTCAGACCAACCTGAATGGAGTGTGGTACAGCGGAGGGGTTTACCGCAGTAAGTTCCAGGATGGAATCTTCTGGGCTGAGTACGGAGGAGGATCGTACTCCCTCAAGTCTGTCCGTATAATGATACGACCTATCGACTGAGCCTGGAACAGTCTCCACCCCACTATCTATGCCATGACCTTTGACCCATCCTAATCCCAACCCTCCCACCCTGTGACGTCTCAACTTCTCCACCAAGCTACCCATCATCACATTATTTTCCTTCCATACATTTTTAAGCGGAGCAGAGAAGCTGTTTAACTGTCGAGACCCAAATCAAACTGCTTCATGGAAACCCTGGTTCTTCTTCAGCCTCTCTGAAGGGAAGATGACAGTGTTCTGCTATTGTTTCAGCTGTGCTTCTATGGAGTCCTCTCCTAGCATGGCCAGACAGCCATATGATAGTGCTGTGAAAGACAGCAGTGGACAGACAAAGTATGAACTCTAACACAGAGCTAGCTGCCACAGCCTTCTACAACAGTCACTATGTTATACTCTGTATGGTCCTCCACAATGTCAAACTTCAATACGCTATGAAGGTGGTTACATTAGGAATTTCAGATGCTTATTTCACACATGTTGACTGGAAAATAAATGGTTAATTTTGCCTTTTTATTTTGCTAATCTCTAGCTGGGTCTGTTGCTAGTGAATGCCTTTCTTCACAGCGTACTAAAGATTGAATAAGTTCCTTATGATGTCATCAGTTAAAAACGTTCCACAGTCAGGGTTGAGAGGCATGCCCGCCCCCCCCCCAGGCTGACAAGACTTGGTACAGTCTTCATGTACATTTaactctcaccccctctctcgctTGCTTTGTTTGGGCTTGTTGTTTCAGGGTTCCCACAGAGAGGAAACGGATTGTAACAATGTGCTTTGTGATGTGAGAACAGCCCAGCTCGCTTTGGTATGTAAATATATTTGGTTTTATTTGCGAGAGTTAATTTAAGACGTATGATTCTGCTGAAGCCAAATGTTTCCTCCATGGTCTCTCCCTTCTGTTATTTATCAACGTATTTATAATGAGTATAGTCAGTCACGCCCTGCTCAAGTTAACCCTGGTATGGCCTTTCTGTTTATTCcagtaaaaaattataataataataatttcaaaaaaataaaaaaaaattaaaaaatcagCACAGACAAACGTCAAGTTGACGGAGGTAAATACCTGCCATGCTCTGCCATCACTTTCCATGTAGTTAAATACTAAATAAAACGGTTTCTAAATACCCTCTGTCCTCA
>XM_021604206.2
tccctcccttccctctccagCCAATCATTTGTGAAAACCTTGAGGAACCAGAGCTCAGTAAGTAGAAGTAACCGGTAGTTTAGTCAAGGACAGAGAGCTCCAGGTCTAAACCCTAACGCCAGCCTCACTGAGCCCACCGTGAGGGGACTTTGCTGGGCAGCAGGCTTCCAACAGCAAGCTTCTGGATTCTGAAGCTCCTGAAATCTAACCACATGACAGAGGTTAGCACCTGTGTAAGATGGGAGAAGTGTAGATGAGCAGAGCCTGAGGAGGGGACTGAACTGGAGCACCGAGTCTCACTGAGGATTGCTTATCGACACACCTACATCTGCTGAAGGATACGGtcttacaaacacacactgagAGAAGCCCAGAGGAAGTCCAGGAGTCATCCAGACAGCCAGTAGAAGTACACTATGCAGGTTGTGGTGGGGGTGAAGCAGGGAGTGTCGTGGAGCCTGTGTGCcctgctctgcctctctttcttggAGCAGAGCCAGTGCAGGGGCTCCAGACAGGCTAGAGAAACCAAGGAATATCCCCTGCTCAGGGCCAAACGAACTCCCACAGAAGACGTCAAGAAGTGCTCCTACACCTTTCTGATTCCCCAGCAGAAGATCACAGGCCCCATCTGTGCCAGTGCAACGGGCCCCGAGCCGGACAAGGAGCGTGTGACACGGATGGACATAGCTGACGTAAAAGAGGTGCTGTTCAAGCAGAGAAGGGAGATTGAGACCCTGCAGCTGGTGGTGGACGTGGACGGCAACATGGTGAACGAGATGAagctgctcaggaaggagagcaGGAACATGAACTCCAGGGTGACCCAGCTCTACATGCAGCTGCTTCACGAGATCATCAGGAAGAGAGACAACTCTCTGGAGCTGGCCCAGCTGGAGAACCGGGTTCTCAACGTCACCTCAGAGATGCTGAAGCTAGCCTCCCGCTACAAGGAGCTGGAAGGGCGTTTTGCAGCGATGGCGGGGGTGGTGAACAACCAATCTGTGCTGATCGCTGCGTTGGAGGAGCAGTGTCTGCGGACCCTGGGGCGCAGTGAGATGCAGGTGGTCCCCCCGCTGGTCCAGGTGGTCCCAGAGAACATCCCCGTCAACAGCCGCTTCACCAACGAGATACAGAGGGATCACAACAACCGGGCATTCCCACGGGGGTCACGCATGGACTCCCCCACCGCCTCTCCATTTGGACTCAACCCGCCGCCACCGCAGGGCACGCTCACCTCAGAAGgtCCGTTTAAGGACTGCTACCAGGTGCGCCAGGCGGGCCACAGCACCAGTGGGATGTACCTGCTGAAGGCAGAGAGTAATGAACAGCTGATCCAGGCCTGGTGTGAACACAGCTTAGACAATGGAGGCTGGACCGTGTTACAGAGAAGGAAGGATGGATCGGTCAACTTCTTCAGGAATTGGGAGAACTACAAGAAAGGCTTTGGGAACATAGATGGTGAATACTGGCTGGGTCTGGAGAACATCTTTAACCTGGCAAAGCAGGGGGACTACAGGCTGCTGGTAGAGCTGGAGGACTGGGTGGGGAAGAAGGTGTATGCTGAGTACAGCAGCTTCCGCCTGGAGCCTGAGAGTGAGGGCTACCGCCTGAGACTGGGCACCTACCAGGGAAACGCTGGAGACTCCCTCAGCAGCCACAATGGGAAAATGTTCACCACGCTGGACAGGGACAAGGATGTTTTCTCAGGTAACTGTGCCCACTTCCATAAGGGAGGTTGGTGGTACAACGCCTGTGGTCAGACCAACCTGAATGGAGTGTGGTACAGCGGAGGGGTTTACCGCAGTAAGTTCCAGGATGGAATCTTCTGGGCTGAGTACGGAGGAGGATCGTACTCCCTCAAGTCTGTCCGTATAATGATACGACCTATCGACTGAGCCTGGAACAGTCTCCACCCCACTATCTATGCCATGACCTTTGACCCATCCTAATCCCAACCCTCCCACCCTGTGACGTCTCAACTTCTCCACCAAGCTACCCATCATCACATTATTTTCCTTCCATACATTTTTAAGCGGAGCAGAGAAGCTGTTTAACTGTCGAGACCCAAATCAAACTGCTTCATGGAAACCCTGGTTCTTCTTCAGCCTCTCTGAAGGGAAGATGACAGTGTTCTGCTATTGTTTCAGCTGTGCTTCTATGGAGTCCTCTCCTAGCATGGCCAGACAGCCATATGATAGTGCTGTGAAAGACAGCAGTGGACAGACAAAGTATGAACTCTAACACAGAGCTAGCTGCCACAGCCTTCTACAACAGTCACTATGTTATACTCTGTATGGTCCTCCACAATGTCAAACTTCAATACGCTATGAAGGTGGTTACATTAGGAATTTCAGATGCTTATTTCACACATGTTGACTGGAAAATAAATGGTTAATTTTGCCTTTTTATTTTGCTAATCTCTAGCTGGGTCTGTTGCTAGTGAATGCCTTTCTTCACAGCGTACTAAAGATTGAATAAGTTCCTTATGATGTCATCAGTTAAAAACGTTCCACAGTCAGGGTTGAGAGGCATGCCCGCCCCCCCCCCAGGCTGACAAGACTTGGTACAGTCTTCATGTACATTTaactctcaccccctctctcgctTGCTTTGTTTGGGCTTGTTGTTTCAGGGTTCCCACAGAGAGGAAACGGATTGTAACAATGTGCTTTGTGATGTGAGAACAGCCCAGCTCGCTTTGGTATGTAAATATATTTGGTTTTATTTGCGAGAGTTAATTTAAGACGTATGATTCTGCTGAAGCCAAATGTTTCCTCCATGGTCTCTCCCTTCTGTTATTTATCAACGTATTTATAATGAGTATAGTCAGTCACGCCCTGCTCAAGTTAACCCTGGTATGGCCTTTCTGTTTATTCcagtaaaaaattataataataataatttcaaaaaaataaaaaaaaattaaaaaatcagCACAGACAAACGTCAAGTTGACGGAGGTAAATACCTGCCATGCTCTGCCATCACTTTCCATGTAGTTAAATACTAAATAAAACGGTTTCTAAATACCCTCTGTCCTCA

Function

NR:

description
angiopoietin-related protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604207.2 False 2951 mRNA 0.50 7 71621173 71661028
XM_021604206.2 True 3045 mRNA 0.50 7 71621173 71661464

Neighbor

gene id symbol gene type direction distance location
zyg11 LOC106613955 coding downstream 78430 71532452 ~ 71542743 (-)
LOC118964746 NA coding downstream 167912 71453146 ~ 71453261 (-)
LOC110524487 LOC106613951 coding downstream 181055 71435035 ~ 71440118 (-)
ipo13 LOC106613950 coding downstream 197664 71371673 ~ 71423509 (-)
pfas pfas coding downstream 254486 71355068 ~ 71366687 (-)
faslg LOC106613961 coding upstream 120217 71781681 ~ 71792919 (-)
si:dkey-86e18.1 LOC106613962 coding upstream 156081 71817545 ~ 71827015 (-)
jun jun coding upstream 170177 71831641 ~ 71833770 (-)
prdx6 LOC106584278 coding upstream 361262 72022726 ~ 72032047 (-)
LOC110524500 NA coding upstream 398107 72059571 ~ 72060414 (-)
G435517 NA non-coding downstream 93142 71527825 ~ 71528031 (-)
G435513 NA non-coding downstream 99018 71521909 ~ 71522155 (-)
G435512 LOC106573797 non-coding downstream 100230 71520434 ~ 71520943 (-)
G435511 NA non-coding downstream 101387 71519267 ~ 71519786 (-)
G435510 NA non-coding downstream 103319 71517623 ~ 71517854 (-)
G435602 NA non-coding upstream 21449 71682913 ~ 71687158 (-)
G435606 NA non-coding upstream 32470 71693934 ~ 71694134 (-)
G435608 NA non-coding upstream 34357 71695821 ~ 71696540 (-)
G435610 NA non-coding upstream 46568 71708032 ~ 71709663 (-)
G435624 NA non-coding upstream 64579 71726043 ~ 71726262 (-)
il23r LOC106613945 other downstream 334181 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 390584 71226012 ~ 71242283 (-)
G435176 NA other downstream 552286 71068025 ~ 71068887 (-)
G435234 NA other downstream 629375 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 2096383 69486406 ~ 69524790 (-)
G436172 LOC100136696 other upstream 379498 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 926820 72588284 ~ 72588576 (-)
G436842 NA other upstream 954832 72616296 ~ 72616944 (-)
G436847 NA other upstream 1010690 72672154 ~ 72672826 (-)
G436873 NA other upstream 1113097 72774561 ~ 72775868 (-)

Expression


Co-expression Network