Gene
RNA
| Item | Value |
|---|---|
| gene id | fam20b |
| gene name | LOC106613959 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 71695892 ~ 71709750 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0030166 | proteoglycan biosynthetic process | biological_process |
| GO:0048701 | embryonic cranial skeleton morphogenesis | biological_process |
| id | description |
|---|---|
| K20825 | FAM20B; glycosaminoglycan xylosylkinase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021604208.2 | True | 3083 | mRNA | 0.49 | 9 | 71695892 | 71709750 |
71,686,000
71,688,000
71,690,000
71,692,000
71,694,000
71,696,000
71,698,000
71,700,000
71,702,000
71,704,000
71,706,000
71,708,000
71,710,000
71,712,000
71,714,000
71,716,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ralgps2 | LOC106613957 | coding | upstream | 8714 | 71552653 ~ 71687963 (+) |
| LOC110524493 | ca163 | coding | upstream | 151430 | 71542762 ~ 71544462 (+) |
| echdc2 | LOC106584286 | coding | upstream | 163927 | 71517672 ~ 71531972 (+) |
| LOC110524491 | LOC106614023 | coding | upstream | 179589 | 71507467 ~ 71516303 (+) |
| LOC110524490 | LOC106613954 | coding | upstream | 205454 | 71462777 ~ 71490438 (+) |
| LOC110522995 | LOC106613964 | coding | downstream | 323379 | 72033129 ~ 72034103 (+) |
| LOC100136696 | LOC100136696 | coding | downstream | 331398 | 72041148 ~ 72053264 (+) |
| LOC110524501 | LOC106613965 | coding | downstream | 359119 | 72068869 ~ 72097126 (+) |
| LOC110524502 | LOC106613967 | coding | downstream | 389008 | 72098758 ~ 72134274 (+) |
| LOC110524503 | LOC106613969 | coding | downstream | 426536 | 72136286 ~ 72167442 (+) |
| G434991 | NA | non-coding | upstream | 7404 | 71688184 ~ 71688488 (+) |
| G435016 | NA | non-coding | upstream | 77798 | 71616877 ~ 71618094 (+) |
| G434969 | NA | non-coding | upstream | 160583 | 71532515 ~ 71535309 (+) |
| G435024 | NA | non-coding | downstream | 626 | 71710376 ~ 71711413 (+) |
| G435621 | NA | non-coding | downstream | 13713 | 71723463 ~ 71724739 (+) |
| G435626 | NA | non-coding | downstream | 16936 | 71726686 ~ 71726994 (+) |
| G435716 | NA | non-coding | downstream | 138700 | 71848450 ~ 71849003 (+) |
| G435801 | NA | non-coding | downstream | 293133 | 72002883 ~ 72005590 (+) |
| G434829 | NA | other | upstream | 396992 | 71298615 ~ 71298900 (+) |
| G434792 | LOC106613943 | other | upstream | 472314 | 71218789 ~ 71223578 (+) |
| G434653 | NA | other | upstream | 735960 | 70959610 ~ 70959932 (+) |
| LOC110524423 | LOC106613476 | other | upstream | 3481788 | 68212224 ~ 68214236 (+) |
| G436403 | NA | other | downstream | 793710 | 72503460 ~ 72504435 (+) |
| G436588 | NA | other | downstream | 1285749 | 72995499 ~ 72995735 (+) |
| G437327 | NA | other | downstream | 1746551 | 73456301 ~ 73495084 (+) |
| LOC110524560 | LOC106560270 | other | downstream | 3053454 | 74729349 ~ 74770168 (+) |
| G438719 | NA | other | downstream | 3062259 | 74772009 ~ 74776469 (+) |
