faslg (LOC106613961)


Basic Information

Item Value
gene id faslg
gene name LOC106613961
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71781681 ~ 71792919 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604209.2
ccttgatacattttttttgtatatatatttttttaagaccATGGCTCAGATATAGAACCACACACCTCCTGCACACAGAGGCAACACACactcctctcacacacactgcagcatgAGCGGTACCCAGGGCTATACATACCCCCAGATGTTTCTAGTGAACTACAGTGGAGGTTCACAGCCGTCGGTCCAACCTCCAGGCCTGGTACCTTGCTGGTCCTTCCCTCCTGCCCAGGAGAGGGTAAGGGAGCAGGGCAGGGCCAGAGGCTGCAGGGGGGTTGGCTCCTGGAGCCTGGTTGTGGCTTTGCTGTTTCTGCTGCTGCTGGTGTTTGGGGCTCTGGGGCTGGGAGCCTACCAGATACACAAGTTACAGACTCAACTGGATGGGATACAACAGGTTAACATTGAGAGCCAAGGTTGTGCGCCTGAGAAGCTAGTGGGTGACCTTCCAGAGTCTGATCCAGACACAGGGAAGAAGGCCAGCAGACCTGCAGCACACGTCATAGGCCGGATCGAGAAGGATGTTTCCCAGAATACCTTGCGTTGGGAGCCCAAGGCAGGGCGGGCCTTCACTGAGGGAGGCGTGGTCTATCGGGATGGTGGTCTGCAGGTCAACGAGACTGGGCTCTACCACATCTACTCCCGGGTGCAGTTTGAGGCCAATCACTGCACCCCTACAGATGCCTTGATTCACTCTGTGTTTGTGAGGAGGCCCTGGAGCTCCAAGCCTCTCACCTTGATAGAGGCGCACAGGGAGGGCTACTGCAGCTCGGGCTCTAATGGGCGTGTCTGGACCTCTGGGAGTTACCTGGGCTCCACACTGCAGCTGGAGAAGCAGGACTGGGTCTATGTGAACGTCTCCCACCCAGCCATGCTCAGCCACACTCATCATGCCAACTTCTTTGGACTCCACAAGATCTAGCGAAAAAGGATGAAATCTGGAGTTGGTTTCAACTGATATTTCACTCAGAGAACCTTAACACTAAAATGGAGAAAAAAGTAGTATTTATTATGATAAAGATCTGACACTGATTCCAACTGCAGGTGCATGTTTGGGATTTTATATCCGTCAACAGGGATCCAATTGTTTATATtctaataaatgtatttaaaaaaaattaaagttCAGACTGAGATCTTTGTCAGAAGTGATTGTATAACAGGAGGATGATtagtgttattttattgtgtttgtgttttttgttATGTCCCTTACATTTTGTTCTCTCAATCTGTTACTCCCTTGCTTcattaaaattgtatttttttaaa
>XR_002473593.2
CATCAGGTGCTGTCAATTAGGGTTCAGCATGGCGAGCCATGAGGCTGTTGGTTTGTTTGCTGACCATGTTTTGGTTTTGAAAATGTCATTTGGGCGTGCCTGTGTGTGGTTTCttttttgaatatatttatttcccaCACCACCAACTGAACAACAGTAATCCATTTGTGCTGGCTGACCATGACGTCAAGAGAGCAAGAGCTGGCCCTGGACCAAGGTTAACATTGAGAGCCAAGGTTGTGCGCCTGAGAAGCTAGTGGGTGACCTTCCAGAGTCTGATCCAGACACAGGGAAGAAGGCCAGCAGACCTGCAGCACACGTCATAGGCCGGATCGAGAAGGATGTTTCCCAGAATACCTTGCGTTGGGAGCCCAAGGCAGGGCGGGCCTTCACTGAGGGAGGCGTGGTCTATCGGGATGGTGGTCTGCAGGTCAACGAGACTGGGCTCTACCACATCTACTCCCGGGTGCAGTTTGAGGCCAATCACTGCACCCCTACAGATGCCTTGATTCACTCTGTGTTTGTGAGGAGGCCCTGGAGCTCCAAGCCTCTCACCTTGATAGAGGCGCACAGGGAGGGCTACTGCAGCTCGGGCTCTAATGGGCGTGTCTGGACCTCTGGGAGTTACCTGGGCTCCACACTGCAGCTGGAGAAGCAGGACTGGGTCTATGTGAACGTCTCCCACCCAGCCATGCTCAGCCACACTCATCATGCCAACTTCTTTGGACTCCACAAGATCTAGCGAAAAAGGATGAAATCTGGAGTTGGTTTCAACTGATATTTCACTCAGAGAACCTTAACACTAAAATGG
>TU493464
GTTCAGCATGGCGAGCCATGAGGCTGTTGGTTTGTTTGCTGACCATGTTTTGGTTTTGAAAATGTCATTTGGGCGTGCCTGTGTGTGGTTTCttttttgaatatatttatttcccaCACCACCAACTGAACAACAGTAATCCATTTGTGCTGGCTGACCATGACGTCAAGAGAGCAAGAGCTGGCCCTGGACCAAGGTTAACATTGAGAGCCAAGGTTGTGCGCCTGAGAAGCTAGTGGGTGACCTTCCAGAGTCTGATCCAGACACAGGGAAGAAGGCCAGCAGACCTGCAGCACACGTCATAGGCCGGATCGAGAAGGATGTTTCCCAGAATACCTTGCGTTGGGAGCCCAAGGCAGGGCGGGCCTTCACTGAGGGAGGCGTGGTCTATCGGGATGGTGGTCTGCAGGTCAACGAGACTGGGCTCTACCACATCTACTCCCGGGTGCAGTTTGAGGCCAATCACTGCACCCCTACAGATGCCTTGATTCACTCTGTGTTTGTGAGGAGGCCCTGGAGCTCCAAGCCTCTCACCTTGATAGAGGCGCACAGGGAGGGCTACTGCAGCTCGGGCTCTAATGGGCGTGTCTGGACCTCTGGGAGTTACCTGGGCTCCACACTGCAGCTGGAGAAGCAGGACTGGGTCTATGTGAACGTCTCCCACCCAGCCATGCTCAGCCACACTCATCATGCCAACTTCTTTGGACTCCACAAGATCTAGCGAAAAAGGATGAAATCTGGAGTTGGTTTCAACTGATATTTCACTCAGAGAACCTTAACACTAAAATGGAGAAAAAAGTAGTATTTATTATGATAAAGATCTGACACTGATTCCAACTGCAGGTGCATGTTTGGGATTTTATATCCGTCAACAGGGATCCAATTGTTTATATtctaataaatgtatttaaaaaaaattaaagttCAGACTGAGATCTTTGTCAGAAGTGATTGTATAACAGGAGGATGATtagtgttattttattgtgtttgtgttttttgttATGTCCCTTACATTTTGTTCTCTCAATCTGTTACTCCCTTGCTTcatta

Function

NR:

description
tumor necrosis factor ligand superfamily member 6-like

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0005615 extracellular space cellular_component
GO:0016020 membrane cellular_component
GO:0005125 cytokine activity molecular_function
GO:0005164 tumor necrosis factor receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604209.2 False 1269 mRNA 0.49 3 71781681 71784311
XR_002473593.2 False 811 mRNA 0.52 3 71781962 71792919
TU493464 True 1053 lncRNA 0.47 3 71781699 71792898

Neighbor

gene id symbol gene type direction distance location
angptl1a LOC106613958 coding downstream 120217 71621173 ~ 71661464 (-)
zyg11 LOC106613955 coding downstream 238938 71532452 ~ 71542743 (-)
LOC118964746 NA coding downstream 328420 71453146 ~ 71453261 (-)
LOC110524487 LOC106613951 coding downstream 341563 71435035 ~ 71440118 (-)
ipo13 LOC106613950 coding downstream 358172 71371673 ~ 71423509 (-)
si:dkey-86e18.1 LOC106613962 coding upstream 24626 71817545 ~ 71827015 (-)
jun jun coding upstream 38722 71831641 ~ 71833770 (-)
prdx6 LOC106584278 coding upstream 229807 72022726 ~ 72032047 (-)
LOC110524500 NA coding upstream 266652 72059571 ~ 72060414 (-)
LOC110522996 NA coding upstream 439245 72232164 ~ 72235211 (-)
G435640 NA non-coding downstream 40868 71730069 ~ 71740813 (-)
G435624 NA non-coding downstream 55419 71726043 ~ 71726262 (-)
G435610 NA non-coding downstream 72018 71708032 ~ 71709663 (-)
G435608 NA non-coding downstream 85141 71695821 ~ 71696540 (-)
G435606 NA non-coding downstream 87547 71693934 ~ 71694134 (-)
G435901 NA non-coding upstream 78392 71871311 ~ 71871524 (-)
G435997 NA non-coding upstream 239470 72032389 ~ 72032606 (-)
G436194 LOC106613965 non-coding upstream 291231 72084150 ~ 72084631 (-)
G436199 LOC106613965 non-coding upstream 299798 72092717 ~ 72096564 (-)
G436204 NA non-coding upstream 330887 72123806 ~ 72126279 (-)
il23r LOC106613945 other downstream 494689 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 551092 71226012 ~ 71242283 (-)
G435176 NA other downstream 712794 71068025 ~ 71068887 (-)
G435234 NA other downstream 789883 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 2256891 69486406 ~ 69524790 (-)
G436172 LOC100136696 other upstream 248043 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 795365 72588284 ~ 72588576 (-)
G436842 NA other upstream 823377 72616296 ~ 72616944 (-)
G436847 NA other upstream 879235 72672154 ~ 72672826 (-)
G436873 NA other upstream 981642 72774561 ~ 72775868 (-)

Expression


Co-expression Network