jun (jun)


Basic Information

Item Value
gene id jun
gene name jun
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71831641 ~ 71833770 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976499.1
CTCCACGCTGGAAGAGTCAGTATACACACAGAGAGCTAGAAAGGCGCGCTTTGAGCAGGAATGCTGTTGAACTATAAGAACGTATAGCACTTACCGCGTCTCATTCGAAGACTGTCAAAAAACTGTGGACAGTTTGAAGAAGTTTGAAGAATTTATACAGCGTTCTGAGTCAGACTATCAGTGAAGCTGAACAGAATACTTTTTCTCGGGACAAGGAGTGCGCTTACAAATTAGAAGTGTGTGTACGGGACACGATTTTATTCCAGACTCTTGGCTCGGCTTCGGAGGTTGAAAGCATTGTCTGACACAGTATGACACTTTTCTCCGAGTTTTACAAcggaaagaacgagagagagCAGCAGAACGCGGGCTACGGATACAACCCCAAAGCTCTGAAACACAGCATGACACTGAACCTGGCTGACCCAACCATCACACTCAAACCTCACCTCCAGGCTAAAGCCAGCGATATCCTCACCTCTCCGGATGTGCAGCTCCTCAAACTTGCCTCCCCAGAGTTGGAGCGACTCATCATTCAGTCCAGCAACGGCCTGATCACCACCACACCTACCCCGACGCAGTTCCTCTGTCCGAGGAACGTGACTGATGAGCAGGAGGGCTTTGCCGAGGGGTTCGTTAGAGCTCTGGCTGAGCTCCATCATCAACACGTCTTGCCCAACGCACCTGGGGTCCCAGTCACCTCCACCGGGCAGACAAGAATCAACAACTCGACCACACTCCCACCTGTTTGCTCCGTGGCTGGGAGCACTGTTTATAACAACGTAGCCATGCGCTCTGAGTCACCTGTCTACGAAAACTTGAACACTTTCACCCCGGCTGTCACCACCAACTCAGCCCCGGGTTACACCACCTCAGTGCCGACTATGAGCTTCCCCTCTGCCCCGCCTCAGCTCCCCATCTATGGGCAGCAGTCTCACCCCCACCCCAGGCTCACAGCCCTGAAAGAGGAGCCCCAGACGGTACCTGAGATGCTCGGGGagacccctccactctctcccatCGACATGGAGAATCAGGAGAGGATCAAAGCCGAGAGGAAGCGCATGAGGAACCGCGTCGCCGCTTCCAAGTGCAGGAAGCGGAAGCTAGAGCGCATCTCCCGGTTGGAGGACAAGGTGAAGAACCTGAAGACTCAGAACTCCGACCTGGCTTCCACAGCCAACATGCTGAGGGAACAGGTAGCCCAGCTCAAACAGAAGGTGATGAACCATGTTAACAGCGGCTGTCAACTCATGCTCACGCAGCAGCTCCAGACCTTCTGAAGAGGAGATGACACTTGGGGAAGAATAGAGAGTTTGAACGAAAAGGACAGATCGTTTATAAGTGACTGGATGGCTGTTCCGTGGCTCCGTGGCATTGTGACAGGTAGAATGGGACAGTAACAGCACGAGAATGGTGGGAGGGAAccgtgactggctggctgccccTAACCGGGTGCTTCGCGCGCCACCGTTGCGCACAGGAGTTGGGGCTCCGGACAGAGCAGAGCGTGTGAAGGAAAAGAAACAGCAACAAACAGGACAAACGGATGTTTTGTTTCGTGTTGTTTTTATTGACTGGCCATTTGTTGGCGTTGACCAAGCTGTGCTTTTATGAATGGACCTTCGTGATGATTCAGTATTATAAAAAACAAAGACAGTAGATTTGAAAACTTCCTGGCGCTTAAGGAGAAGGCGTGTAGCCTAGTCTAAACAGATGAAACCGTTTAACAAAAGCTGCCTAACTTTTGAGTTACAATGTATTGTTTATTCTTAATTGTATTGAATTAAGTTAGAAAAAAGCTTAGTTACTTGTTTTTCTTCTGAAGTTGTGTAATGGGGTTCCACTCATTGTTATTAGTTGTATATAAGATTGACTTGGAGTACTTACATTTACAATTTGTAATAAGAAACAATATAATTTTGTATGTTCATTTTCTGAGCACTTCAGAAACAAATCAATATTTAAGAAATGTAATAAAACATATGTGAACTGAA
>XM_036976500.1
CTCCACGCTGGAAGAGTCAGTATACACACAGAGAGCTAGAAAGGCGCGCTTTGAGCAGGAATGCTGTTGAACTATAAGAACGTATAGCACTTACCGCGTCTCATTCGAAGACTGTCAAAAAACTGTGGACAGTTTGAAGAAGTTTGAAGAATTTATACAGCGTTCTGAGTCAGACTATCAGTGAAGCTGAACAGAATACTTTTTCTCGGGACAAGGAGTGCGCTTACAAATTAGAAGTGTGTGTACGGGACACGATTTTATTCCAGACTCTTGGCTCGGCTTCGGAGGTTGAAAGCATTGTCTGACACAGTATGACACTTTTCTCCGAGTTTTACAAcggaaagaacgagagagagCAGAACGCGGGCTACGGATACAACCCCAAAGCTCTGAAACACAGCATGACACTGAACCTGGCTGACCCAACCATCACACTCAAACCTCACCTCCAGGCTAAAGCCAGCGATATCCTCACCTCTCCGGATGTGCAGCTCCTCAAACTTGCCTCCCCAGAGTTGGAGCGACTCATCATTCAGTCCAGCAACGGCCTGATCACCACCACACCTACCCCGACGCAGTTCCTCTGTCCGAGGAACGTGACTGATGAGCAGGAGGGCTTTGCCGAGGGGTTCGTTAGAGCTCTGGCTGAGCTCCATCATCAACACGTCTTGCCCAACGCACCTGGGGTCCCAGTCACCTCCACCGGGCAGACAAGAATCAACAACTCGACCACACTCCCACCTGTTTGCTCCGTGGCTGGGAGCACTGTTTATAACAACGTAGCCATGCGCTCTGAGTCACCTGTCTACGAAAACTTGAACACTTTCACCCCGGCTGTCACCACCAACTCAGCCCCGGGTTACACCACCTCAGTGCCGACTATGAGCTTCCCCTCTGCCCCGCCTCAGCTCCCCATCTATGGGCAGCAGTCTCACCCCCACCCCAGGCTCACAGCCCTGAAAGAGGAGCCCCAGACGGTACCTGAGATGCTCGGGGagacccctccactctctcccatCGACATGGAGAATCAGGAGAGGATCAAAGCCGAGAGGAAGCGCATGAGGAACCGCGTCGCCGCTTCCAAGTGCAGGAAGCGGAAGCTAGAGCGCATCTCCCGGTTGGAGGACAAGGTGAAGAACCTGAAGACTCAGAACTCCGACCTGGCTTCCACAGCCAACATGCTGAGGGAACAGGTAGCCCAGCTCAAACAGAAGGTGATGAACCATGTTAACAGCGGCTGTCAACTCATGCTCACGCAGCAGCTCCAGACCTTCTGAAGAGGAGATGACACTTGGGGAAGAATAGAGAGTTTGAACGAAAAGGACAGATCGTTTATAAGTGACTGGATGGCTGTTCCGTGGCTCCGTGGCATTGTGACAGGTAGAATGGGACAGTAACAGCACGAGAATGGTGGGAGGGAAccgtgactggctggctgccccTAACCGGGTGCTTCGCGCGCCACCGTTGCGCACAGGAGTTGGGGCTCCGGACAGAGCAGAGCGTGTGAAGGAAAAGAAACAGCAACAAACAGGACAAACGGATGTTTTGTTTCGTGTTGTTTTTATTGACTGGCCATTTGTTGGCGTTGACCAAGCTGTGCTTTTATGAATGGACCTTCGTGATGATTCAGTATTATAAAAAACAAAGACAGTAGATTTGAAAACTTCCTGGCGCTTAAGGAGAAGGCGTGTAGCCTAGTCTAAACAGATGAAACCGTTTAACAAAAGCTGCCTAACTTTTGAGTTACAATGTATTGTTTATTCTTAATTGTATTGAATTAAGTTAGAAAAAAGCTTAGTTACTTGTTTTTCTTCTGAAGTTGTGTAATGGGGTTCCACTCATTGTTATTAGTTGTATATAAGATTGACTTGGAGTACTTACATTTACAATTTGTAATAAGAAACAATATAATTTTGTATGTTCATTTTCTGAGCACTTCAGAAACAAATCAATATTTAAGAAATGTAATAAAACATATGTGAACTGAA
>NM_001124411.1
ACACACAGAGAGCTAGAAAGGCGCGCTTTGAGCAGGAATGCTGTTGAACTATAAGAACGTATAGCACTTACCGCGTCTCATTCGAAGACTGTCAAAAAACTGTGGACAGTTTGAAGAAGTTTGAAGAATTTATACAGCGTTCTGAGTCAGACTATCAGTGAAGCTGAACAGAATACTTTTTCTCGGGACAAGGAGTGCGCTTACAAATTAGAAGTGTGTGTACGGGACACGATTTTATTCCAGACTCTTGGCTCGGCTTCGGAGGTTGAAAGCATTGTCTGACACAGTATGACACTTTTCTCCGAGTTTTACAAcggaaagaacgagagagaggtaaCCGAAACACACATATCTTATGTTTGAGTAGCCTACTAGAGACATTTCAAACTGAGTGTTTGGTTTATATTCTATGTCTACCAAGATGGAAACTACTTTCTACGACGACTCGCATAACGCTTTCTCCCAGCAGCAGAACGCGGGCTACGGATACAACCCCAAAGCTCTGAAACACAGCATGACACTGAACCTGGCTGACCCAACCATCACACTCAAACCTCACCTCCAGGCTAAAGCCAGCGATATCCTCACCTCTCCGGATGTGCAGCTCCTCAAACTTGCCTCCCCAGAGTTGGAGCGACTCATCATTCAGTCCAGCAACGGCCTGATCACCACCACACCTACCCCGACGCAGTTCCTCTGTCCGAGGAACGTGACTGATGAGCAGGAGGGCTTTGCCGAGGGGTTCGTTAGAGCTCTGGCTGAGCTCCATCATCAACACGTCTTGCCCAACGCACCTGGGGTCCCAGTCACCTCCACCGGGCAGACAAGAATCAACAACTCGACCACACTCCCACCTGTTTGCTCCGTGGCTGGGAGCACTGTTTATAACAACGTAGCCATGCGCTCTGAGTCACCTGTCTACGAAAACTTGAACACTTTCACCCCGGCTGTCACCACCAACTCAGCCCCGGGTTACACCACCTCAGTGCCGACTATGAGCTTCCCCTCTGCCCCGCCTCAGCTCCCCATCTATGGGCAGCAGTCTCACCCCCACCCCAGGCTCACAGCCCTGAAAGAGGAGCCCCAGACGGTACCTGAGATGCTCGGGGagacccctccactctctcccatCGACATGGAGAATCAGGAGAGGATCAAAGCCGAGAGGAAGCGCATGAGGAACCGCGTCGCCGCTTCCAAGTGCAGGAAGCGGAAGCTAGAGCGCATCTCCCGGTTGGAGGACAAGGTGAAGAACCTGAAGACTCAGAACTCCGACCTGGCTTCCACAGCCAACATGCTGAGGGAACAGGTAGCCCAGCTCAAACAGAAGGTGATGAACCATGTTAACAGCGGCTGTCAACTCATGCTCACGCAGCAGCTCCAGACCTTCTGAAGAGGAGATGACACTTGGGGAAGAATAGAGAGTTTGAACGAAAAGGACAGATCGTTTATAAGTGACTGGATGGCTGTTCCGTGGCTCCGTGGCATTGTGACAGGTAGAATGGGACAGTAACAGCACGAGAATGGTGGGAGGGAAccgtgactggctggctgccccTAACCGGGTGCTTCGCGCGCCACCGTTGCGCACAGGAGTTGGGGCTCCGGACAGAGCAGAGCGTGTGAAGGAAAAGAAACAGCAACAAACAGGACAAACGGATGTTTTGTTTCGTGTTGTTTTTATTGACTGGCCATTTGTTGGCGTTGACCAAGCTGTGCTTTTATGAATGGACCTTCGTGATGATTCAGTATTATAAAAAACAAAGACAGTAGATTTGAAAACTTCCTGGCGCTTAAGGAGAAGGCGTGTAGCCTAGTCTAAACAGATGAAACCGTTTAACAAAAGCTGCCTAACTTTTGAGTTACAATGTATTGTTTATTCTTAATTGTATTGAATTAAGTTAGAAAAAAGCTTAGTTACTTGTTTTTCTTCTGAAGTTGTGTAATGGGGTTCCACTCATTGTTATTAGTTGTATATAAGATTGACTTGGAGTACTTACATTTACAATTTGTAATAAGAAACAATATAATTTTGTATGTTCATTTTCTGAGCACTTCAGAAACAAATCAATATTTAAGAAATGTAATAAAACATATGTGAACTGA

Function

symbol description
jun Enables DNA-binding transcription factor activity, RNA polymerase II-specific. Contributes to DNA-binding transcription factor activity and beta-catenin binding activity. Involved in regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including hematopoietic progenitor cell differentiation; response to cadmium ion; and response to methylmercury. Part of transcription regulator complex. Is expressed in several structures, including digestive system; hematopoietic system; mesoderm; musculature system; and sensory system. Human ortholog(s) of this gene implicated in pulmonary tuberculosis. Orthologous to human JUN (Jun proto-oncogene, AP-1 transcription factor subunit).

NR:

description
transcription factor AP-1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K04448 JUN; transcription factor AP-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976499.1 False 1997 mRNA 0.49 2 71831641 71833770
XM_036976500.1 False 1994 mRNA 0.49 2 71831641 71833770
NM_001124411.1 True 2106 mRNA 0.48 1 71831642 71833747

Neighbor

gene id symbol gene type direction distance location
si:dkey-86e18.1 LOC106613962 coding downstream 4626 71817545 ~ 71827015 (-)
faslg LOC106613961 coding downstream 38722 71781681 ~ 71792919 (-)
angptl1a LOC106613958 coding downstream 170177 71621173 ~ 71661464 (-)
zyg11 LOC106613955 coding downstream 288898 71532452 ~ 71542743 (-)
LOC118964746 NA coding downstream 378380 71453146 ~ 71453261 (-)
prdx6 LOC106584278 coding upstream 188956 72022726 ~ 72032047 (-)
LOC110524500 NA coding upstream 225801 72059571 ~ 72060414 (-)
LOC110522996 NA coding upstream 398394 72232164 ~ 72235211 (-)
LOC118964719 NA coding upstream 438106 72271876 ~ 72272749 (-)
LOC110524508 LOC106613974 coding upstream 441688 72275458 ~ 72359871 (-)
G435640 NA non-coding downstream 90828 71730069 ~ 71740813 (-)
G435624 NA non-coding downstream 105379 71726043 ~ 71726262 (-)
G435610 NA non-coding downstream 121978 71708032 ~ 71709663 (-)
G435608 NA non-coding downstream 135101 71695821 ~ 71696540 (-)
G435901 NA non-coding upstream 37541 71871311 ~ 71871524 (-)
G435997 NA non-coding upstream 198619 72032389 ~ 72032606 (-)
G436194 LOC106613965 non-coding upstream 250380 72084150 ~ 72084631 (-)
G436199 LOC106613965 non-coding upstream 258947 72092717 ~ 72096564 (-)
G436204 NA non-coding upstream 290036 72123806 ~ 72126279 (-)
il23r LOC106613945 other downstream 544649 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 601052 71226012 ~ 71242283 (-)
G435176 NA other downstream 762754 71068025 ~ 71068887 (-)
G435234 NA other downstream 839843 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 2306851 69486406 ~ 69524790 (-)
G436172 LOC100136696 other upstream 207192 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 754514 72588284 ~ 72588576 (-)
G436842 NA other upstream 782526 72616296 ~ 72616944 (-)
G436847 NA other upstream 838384 72672154 ~ 72672826 (-)
G436873 NA other upstream 940791 72774561 ~ 72775868 (-)

Expression


Co-expression Network