prdx6 (LOC106584278)


Basic Information

Item Value
gene id prdx6
gene name LOC106584278
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72022726 ~ 72032047 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979055.1
ATGTGTATagTCACTGATGCTGTAAATGGCACATATGAGCCAGAGCCTATTTTATGTCTGCTATGTCTCCTGTTAGGAGACTAATTCCCCAACTTCGAAGCCGAGACAACCATCGGGAAGATCAAATTCCATGACTTCCTAGGAAACTAGATACTTCTCTCCTCCAGATGGGGAGTCCTGTTCTCCCATCCCCAGGACTTTACTCCAGTGTGTACCACAGAACTGGCCTGTGCTGCCAAGATCAGCTTTGAGTTTAAGAAACGCAACGTCAAGATGATCGCTCTGTCCATAGACAGCGTGGCTGACCATCTTGCCTGGAGCAAGgatGTGATGCCGTTTAACAGTGAGAGTGGGTGCTCTCCCCTGCCCTTCCCCATCATCGCTGATGATGAGGGAGCTCTTCAGCTGGGCATGCTGGACCCTGATGAGATTGACAAGGATGGCATGCCCCTCACCGCGCTCTGTGTGTTTGTGGTTGGTCCAGATAAGATGAAGCTGTCCATCATGTACCCGGCCACCACTGGTAGGAACTTTGACGAACTGCTTCGTGTCATCGACTCTCTGCAGCTCACTGCTCTCGAGAAGTTGGCCACACCTGTTGACTGGAAGCCTGGTCAGAAGTGTATGGTTATTCCCGCTCTTTCTGGTGCCCACTGCAAGAGTATCCACTGCTACTTATCCAGTTATTTTGTGACTTTTCATAGTTGA

Function

NR:

description
peroxiredoxin-6-like isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016209 antioxidant activity molecular_function
GO:0051920 peroxiredoxin activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979055.1 True 708 mRNA 0.50 7 72022726 72032047

Neighbor

gene id symbol gene type direction distance location
jun jun coding downstream 188956 71831641 ~ 71833770 (-)
si:dkey-86e18.1 LOC106613962 coding downstream 195711 71817545 ~ 71827015 (-)
faslg LOC106613961 coding downstream 229807 71781681 ~ 71792919 (-)
angptl1a LOC106613958 coding downstream 361262 71621173 ~ 71661464 (-)
zyg11 LOC106613955 coding downstream 479983 71532452 ~ 71542743 (-)
LOC110524500 NA coding upstream 27524 72059571 ~ 72060414 (-)
LOC110522996 NA coding upstream 200117 72232164 ~ 72235211 (-)
LOC118964719 NA coding upstream 239829 72271876 ~ 72272749 (-)
LOC110524508 LOC106613974 coding upstream 243411 72275458 ~ 72359871 (-)
LOC110524515 LOC106560227 coding upstream 820021 72852068 ~ 72866268 (-)
G435901 NA non-coding downstream 151202 71871311 ~ 71871524 (-)
G435640 NA non-coding downstream 281913 71730069 ~ 71740813 (-)
G435624 NA non-coding downstream 296464 71726043 ~ 71726262 (-)
G435610 NA non-coding downstream 313063 71708032 ~ 71709663 (-)
G435997 NA non-coding upstream 342 72032389 ~ 72032606 (-)
G436194 LOC106613965 non-coding upstream 52103 72084150 ~ 72084631 (-)
G436199 LOC106613965 non-coding upstream 60670 72092717 ~ 72096564 (-)
G436204 NA non-coding upstream 91759 72123806 ~ 72126279 (-)
G436230 NA non-coding upstream 141655 72173702 ~ 72174022 (-)
il23r LOC106613945 other downstream 735734 71285725 ~ 71308015 (-)
LOC110524478 LOC106613944 other downstream 792137 71226012 ~ 71242283 (-)
G435176 NA other downstream 953839 71068025 ~ 71068887 (-)
G435234 NA other downstream 1030928 70990892 ~ 70991798 (-)
G433683 LOC106613912 other downstream 2497936 69486406 ~ 69524790 (-)
G436172 LOC100136696 other upstream 8915 72040962 ~ 72121697 (-)
G436830 LOC106605384 other upstream 556237 72588284 ~ 72588576 (-)
G436842 NA other upstream 584249 72616296 ~ 72616944 (-)
G436847 NA other upstream 640107 72672154 ~ 72672826 (-)
G436873 NA other upstream 742514 72774561 ~ 72775868 (-)

Expression


Co-expression Network