mettl13 (LOC106613973)


Basic Information

Item Value
gene id mettl13
gene name LOC106613973
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72235213 ~ 72239514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604226.2
TCAGAGCTATCCAATCGAAATGTAGTTGTGTACAGCTCGGAATAATGTCCGGGTGAACATGCCATGTGGGAAAGATAGGGAGCTGAAAATCCAAACATTTCTAGCTTGATAATACGTTTTTCGACCAATTGACAATCTACCAATTGCTACCGTTACACATTTATAATGTCCTGCCTGTTCCTGAATCTTAGCTAGCTTGTTCAAAGCTAATCGAAAGTATTCTAACgttagtttgtttacaagaagctagctagctactgatatAGACCTAGCAAGTGTTAAAGATGAGTCTTCTACCTCGCACTGCCGAGGAGTTCAGTTCTGCAGAGTACTGGGAACGCTTCTtcaagaagagaggagagaaggcttTTGAGTGGTATGGAGACTACAACAAACTCTGTGGCATGCTGCACAAATACATCAAACCGCGGGATAAGGTCTTGGTGGTGGGCTGTGGTAACTCTGAGCTGAGTGAGCAGCTGTATGACGTTGGCTACAGACATCTGACCAACATTGACATTAGTGAGACGGTGGTGAATCACATGAACCAGAAGAATGCCAAGCAGCGCCCAGACCTGACCTTCCAGACGGTGGATGCCACCCAGACGCCCTACGAGGACGGAAGCTACCAGGCTGTACTGGACAAGGGGACACTGGACGCCATGGCCTCCCAGGAGGGGGCTCTAGCTGGGAGGATGCTGGCTGAGGTGGGCCGTGTCCTGGGTATAGGAGGCCGCTACGTCTGTGTGACCCTGGCCCAGGAGAGTGTCATCAAGCTGGCTGTGGAGCACTTCATCCAGGTGGGCTGGGCTGTGAGACTCCATTGTCTGGGTGACCCAGAGAGCCAGGAGGACTCTTCCTTCGCTCTGCCTGTCTTCGTATTGGTTTGCACAAAGTTCCGCCAGCCAATGCCCATGCCCATCCTGGAGATGTGCCAAGGGGAGGATGGTATCCCCGTGAGGCTTCCCATGGTGGCAGACCTGCTGTCTGTGGTGAGAGAGCGCCAGGCATACGCCATGCTGAGACAGAGGCTCCGTACAGGTACAGACGCGACCTCTACCCCCTCGTTGACCCTCTGCCATGCCCCCACTGGGCGACCCCGCTACACTCTCACCGTACAGGACTGCCCCCCTGGTGCCAAGGTTCCTCGTGCAAACCACTTTGCCATCTTCATAGTGCCTCAGGGCAGAGAGACTGATTGGCTGTACGGCTTGGCTGAGGGGCGGGGCCAACTAGCGGCTAGCGCTAACTTCAGACGTCTGGTTGTCGTGGCCATGCACAGAGAACAGGAGTATACCGACATGCAGGCTGTCCAATCAGAGCTCTCCCCCATGGTGATGGAACTCGCCCCCCCTGGGATGCCAGCCAATCAGAAAGTTCCGTTCCTGTCGGTGGGAGGTGAGCTGGGTtggagggaggtggtgagtcaTGGTACCAGTGATCTGAGTGGTCAGTACTCTGTAGAGGacgtgagaggagaggatggtcaGCTCTACCGTAGACTGGTGTTCCTGGGTAACGACGGACTGGTCCAGTCAGAGAGCCGCCTCACTAATCCAGCAGCAGCAGCAGCCTCGTCTCAGAAGAATAAAAAGAGCAGAAGGAAAGCCAAGCCCTCTGCCCCTCTCCCAATGACAACCCCATCCCAGACACCAGGTGGCGCCCTGGAGGTGGACAAAGGCTATCTATGCTGTGCCCACCACAGGGTCATGGTGGCTGGCCTCGCCATGCTAGGAGTGGGCACCGACCACAACAAAGATGTCCCAGTGTCAGTGCTCCTGGTGGGACTGGGTGGAGGAGGGCTGCCCCAGTTCCTGCGGGACTTTGTACCTGGAGCcagggtggaggtggtggagctGGATCCGGCAGTACTGGAGGTGGCTCAGGGATGGTTCGGCTTCACACCTGATGACAGGCTCACTGTCACACTGGGAGATGGACTGGAACACATTAACAACAttgagagagaagGTGGTCATCAGTAtgatgtcatcatgtttgacGTGGACAGTAAGGACCCCAGTTTGGGGATGAGCTGTCCTCCTCCTGCCTTCGTAGAAACAGCCTTCCTGGAGAGAGTTGGCAATCTGCTGACATCTCGAGGTACAGTGTGTTCATGTTGAACCTTGTGTGTCGTGACTCTGCATTGAAGAAGAGTGTGTTGGGTCGTGTGCGGGGTGTGTTCCCGCGTGTGCTCTCCCGGGGCATCGAGGGGGAGGTCAACGAGGTGCTGCTGTGCTCCAGGGGAACGAGGGAGACAGGGGTCCCGCCCAGCCTGCTGAAGGCAGGGAAGACTCTACAGGTAGCACTGGGCA
>XM_021604224.2
TCAGAGCTATCCAATCGAAATGTAGTTGTGTACAGCTCGGAATAATGTCCGGGTGAACATGCCATGTGGGAAAGATAGGGAGCTGAAAATCCAAACATTTCTAGCTTGATAATACGTTTTTCGACCAATTGACAATCTACCAATTGCTACCGTTACACATTTATAATGTCCTGCCTGTTCCTGAATCTTAGCTAGCTTGTTCAAAGCTAATCGAAAGTATTCTAACgttagtttgtttacaagaagctagctagctactgatatAGACCTAGCAAGTGTTAAAGATGAGTCTTCTACCTCGCACTGCCGAGGAGTTCAGTTCTGCAGAGTACTGGGAACGCTTCTtcaagaagagaggagagaaggcttTTGAGTGGTATGGAGACTACAACAAACTCTGTGGCATGCTGCACAAATACATCAAACCGCGGGATAAGGTCTTGGTGGTGGGCTGTGGTAACTCTGAGCTGAGTGAGCAGCTGTATGACGTTGGCTACAGACATCTGACCAACATTGACATTAGTGAGACGGTGGTGAATCACATGAACCAGAAGAATGCCAAGCAGCGCCCAGACCTGACCTTCCAGACGGTGGATGCCACCCAGACGCCCTACGAGGACGGAAGCTACCAGGCTGTACTGGACAAGGGGACACTGGACGCCATGGCCTCCCAGGAGGGGGCTCTAGCTGGGAGGATGCTGGCTGAGGTGGGCCGTGTCCTGGGTATAGGAGGCCGCTACGTCTGTGTGACCCTGGCCCAGGAGAGTGTCATCAAGCTGGCTGTGGAGCACTTCATCCAGGTGGGCTGGGCTGTGAGACTCCATTGTCTGGGTGACCCAGAGAGCCAGGAGGACTCTTCCTTCGCTCTGCCTGTCTTCGTATTGGTTTGCACAAAGTTCCGCCAGCCAATGCCCATGCCCATCCTGGAGATGTGCCAAGGGGAGGATGGTATCCCCGTGAGGCTTCCCATGGTGGCAGACCTGCTGTCTGTGGTGAGAGAGCGCCAGGCATACGCCATGCTGAGACAGAGGCTCCGTACAGGTACAGACGCGACCTCTACCCCCTCGTTGACCCTCTGCCATGCCCCCACTGGGCGACCCCGCTACACTCTCACCGTACAGGACTGCCCCCCTGGTGCCAAGGTTCCTCGTGCAAACCACTTTGCCATCTTCATAGTGCCTCAGGGCAGAGAGACTGATTGGCTGTACGGCTTGGCTGAGGGGCGGGGCCAACTAGCGGCTAGCGCTAACTTCAGACGTCTGGTTGTCGTGGCCATGCACAGAGAACAGGAGTATACCGACATGCAGGCTGTCCAATCAGAGCTCTCCCCCATGGTGATGGAACTCGCCCCCCCTGGGATGCCAGCCAATCAGAAAGTTCCGTTCCTGTCGGTGGGAGGTGAGCTGGGTtggagggaggtggtgagtcaTGGTACCAGTGATCTGAGTGGTCAGTACTCTGTAGAGGacgtgagaggagaggatggtcaGCTCTACCGTAGACTGGTGTTCCTGGGTAACGACGGACTGGTCCAGTCAGAGAGCCGCCTCACTAATCCAGCAGCAGCAGCAGCCTCGTCTCAGAAGAATAAAAAGAGCAGAAGGAAAGCCAAGCCCTCTGCCCCTCTCCCAATGACAACCCCATCCCAGACACCAGGTGGCGCCCTGGAGGTGGACAAAGGCTATCTATGCTGTGCCCACCACAGGGTCATGGTGGCTGGCCTCGCCATGCTAGGAGTGGGCACCGACCACAACAAAGATGTCCCAGTGTCAGTGCTCCTGGTGGGACTGGGTGGAGGAGGGCTGCCCCAGTTCCTGCGGGACTTTGTACCTGGAGCcagggtggaggtggtggagctGGATCCGGCAGTACTGGAGGTGGCTCAGGGATGGTTCGGCTTCACACCTGATGACAGGCTCACTGTCACACTGGGAGATGGACTGGAACACATTAACAACAttgagagagaagGTGGTCATCAGTAtgatgtcatcatgtttgacGTGGACAGTAAGGACCCCAGTTTGGGGATGAGCTGTCCTCCTCCTGCCTTCGTAGAAACAGCCTTCCTGGAGAGAGTTGGCAATCTGCTGACATCTCGAGGTGTGTTCATGTTGAACCTTGTGTGTCGTGACTCTGCATTGAAGAAGAGTGTGTTGGGTCGTGTGCGGGGTGTGTTCCCGCGTGTGCTCTCCCGGGGCATCGAGGGGGAGGTCAACGAGGTGCTGCTGTGCTCCAGGGGAACGAGGGAGACAGGGGTCCCGCCCAGCCTGCTGAAGGCAGGGAAGACTCTACAGGTAGCACTGGGCATGAACAGCAGTAGAACAGCAACCTGCATCCCTCAGATAGACATCACTGAGCTGCTAGAGGACCTGAACGTGGcatgagggagagggggatgaggagaagaggacaaTGTGAAAAAGTATCATTTTAATTCTCAAAATGCTACATGCAATAATGtatgaaataaaaatgttaaggtgtatactgaacaaaaatataaatgctacATGTGATAATTTCAGAGTTGCAGTTCATATTAGGAAATAATttgatttaaataaaataattaggccctaacctatggatttcacgactgggaatacagatatgcatctgtagaGCATGGATcaggaaaccagtcagtatctggtgtgaccaccatttgcctcatgcagtgtgacacatctccttcgcatagagtttatCAGGCTGTTGATAGTGGCCAATGGactgttgtcccactcttcaatggatttgcgaagttgctggatattggcgggaactggaacacgctgtcgtacacgtcgatccagatcatcccaaacatgctcattgggtgacatatctggtgagcATGCAAGCTATGGAAGAAGTGGGACATTTTCACCTTCCAGGAAATGTGTACAGAATAAATAAACGTTTTATTCTCAAA
>XM_021604225.2
TCAGAGCTATCCAATCGAAATGTAGTTGTGTACAGCTCGGAATAATGTCCGGGTGAACATGCCATGTGGGAAAGATAGGGAGCTGAAAATCCAAACATTTCTAGCTTGATAATACGTTTTTCGACCAATTGACAATCTACCAATTGCTACCGTTACACATTTATAATGTCCTGCCTGTTCCTGAATCTTAGCTAGCTTGTTCAAAGCTAATCGAAAGTATTCTAACgttagtttgtttacaagaagctagctagctactgatatAGACCTAGCAAGTGTTAAAGATGAGTCTTCTACCTCGCACTGCCGAGGAGTTCAGTTCTGCAGAGTACTGGGAACGCTTCTtcaagaagagaggagagaaggcttTTGAGTGGTATGGAGACTACAACAAACTCTGTGGCATGCTGCACAAATACATCAAACCGCGGGATAAGGTCTTGGTGGTGGGCTGTGGTAACTCTGAGCTGAGTGAGCAGCTGTATGACGTTGGCTACAGACATCTGACCAACATTGACATTAGTGAGACGGTGGTGAATCACATGAACCAGAAGAATGCCAAGCAGCGCCCAGACCTGACCTTCCAGACGGTGGATGCCACCCAGACGCCCTACGAGGACGGAAGCTACCAGGCTGTACTGGACAAGGGGACACTGGACGCCATGGCCTCCCAGGAGGGGGCTCTAGCTGGGAGGATGCTGGCTGAGGTGGGCCGTGTCCTGGGTATAGGAGGCCGCTACGTCTGTGTGACCCTGGCCCAGGAGAGTGTCATCAAGCTGGCTGTGGAGCACTTCATCCAGGTGGGCTGGGCTGTGAGACTCCATTGTCTGGGTGACCCAGAGAGCCAGGAGGACTCTTCCTTCGCTCTGCCTGTCTTCGTATTGGTTTGCACAAAGTTCCGCCAGCCAATGCCCATGCCCATCCTGGAGATGTGCCAAGGGGAGGATGGTATCCCCGTGAGGCTTCCCATGGTGGCAGACCTGCTGTCTGTGGTGAGAGAGCGCCAGGCATACGCCATGCTGAGACAGAGGCTCCGTACAGGTACAGACGCGACCTCTACCCCCTCGTTGACCCTCTGCCATGCCCCCACTGGGCGACCCCGCTACACTCTCACCGTACAGGACTGCCCCCCTGGTGCCAAGGTTCCTCGTGCAAACCACTTTGCCATCTTCATAGTGCCTCAGGGCAGAGAGACTGATTGGCTGTACGGCTTGGCTGAGGGGCGGGGCCAACTAGCGGCTAGCGCTAACTTCAGACGTCTGGTTGTCGTGGCCATGCACAGAGAACAGGAGTATACCGACATGCAGGCTGTCCAATCAGAGCTCTCCCCCATGGTGATGGAACTCGCCCCCCCTGGGATGCCAGCCAATCAGAAAGTTCCGTTCCTGTCGGTGGGAGGTGAGCTGGGTtggagggaggtggtgagtcaTGGTACCAGTGATCTGAGTGGTCAGTACTCTGTAGAGGacgtgagaggagaggatggtcaGCTCTACCGTAGACTGGTGTTCCTGGGTAACGACGGACTGGTCCAGTCAGAGAGCCGCCTCACTAATCCAGCAGCAGCAGCCTCGTCTCAGAAGAATAAAAAGAGCAGAAGGAAAGCCAAGCCCTCTGCCCCTCTCCCAATGACAACCCCATCCCAGACACCAGGTGGCGCCCTGGAGGTGGACAAAGGCTATCTATGCTGTGCCCACCACAGGGTCATGGTGGCTGGCCTCGCCATGCTAGGAGTGGGCACCGACCACAACAAAGATGTCCCAGTGTCAGTGCTCCTGGTGGGACTGGGTGGAGGAGGGCTGCCCCAGTTCCTGCGGGACTTTGTACCTGGAGCcagggtggaggtggtggagctGGATCCGGCAGTACTGGAGGTGGCTCAGGGATGGTTCGGCTTCACACCTGATGACAGGCTCACTGTCACACTGGGAGATGGACTGGAACACATTAACAACAttgagagagaagGTGGTCATCAGTAtgatgtcatcatgtttgacGTGGACAGTAAGGACCCCAGTTTGGGGATGAGCTGTCCTCCTCCTGCCTTCGTAGAAACAGCCTTCCTGGAGAGAGTTGGCAATCTGCTGACATCTCGAGGTGTGTTCATGTTGAACCTTGTGTGTCGTGACTCTGCATTGAAGAAGAGTGTGTTGGGTCGTGTGCGGGGTGTGTTCCCGCGTGTGCTCTCCCGGGGCATCGAGGGGGAGGTCAACGAGGTGCTGCTGTGCTCCAGGGGAACGAGGGAGACAGGGGTCCCGCCCAGCCTGCTGAAGGCAGGGAAGACTCTACAGGTAGCACTGGGCATGAACAGCAGTAGAACAGCAACCTGCATCCCTCAGATAGACATCACTGAGCTGCTAGAGGACCTGAACGTGGcatgagggagagggggatgaggagaagaggacaaTGTGAAAAAGTATCATTTTAATTCTCAAAATGCTACATGCAATAATGtatgaaataaaaatgttaaggtgtatactgaacaaaaatataaatgctacATGTGATAATTTCAGAGTTGCAGTTCATATTAGGAAATAATttgatttaaataaaataattaggccctaacctatggatttcacgactgggaatacagatatgcatctgtagaGCATGGATcaggaaaccagtcagtatctggtgtgaccaccatttgcctcatgcagtgtgacacatctccttcgcatagagtttatCAGGCTGTTGATAGTGGCCAATGGactgttgtcccactcttcaatggatttgcgaagttgctggatattggcgggaactggaacacgctgtcgtacacgtcgatccagatcatcccaaacatgctcattgggtgacatatctggtgagcATGCAAGCTATGGAAGAAGTGGGACATTTTCACCTTCCAGGAAATGTGTACAGAATAAATAAACGTTTTATTCTCAAA

Function

NR:

description
methyltransferase-like protein 13 isoform X2

GO: NA

KEGG:

id description
K25166 EEF1AKNMT, METTL13; eEF1A lysine and N-terminal methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604226.2 False 2315 mRNA 0.55 10 72235213 72238886
XM_021604224.2 False 2938 mRNA 0.52 10 72235213 72239514
XM_021604225.2 True 2935 mRNA 0.52 10 72235213 72239514

Neighbor

gene id symbol gene type direction distance location
myoc LOC106613972 coding upstream 7032 72219897 ~ 72228181 (+)
LOC110524504 vamp4 coding upstream 25552 72175117 ~ 72209661 (+)
LOC110524503 LOC106613969 coding upstream 67771 72136286 ~ 72167442 (+)
LOC110524502 LOC106613967 coding upstream 100939 72098758 ~ 72134274 (+)
LOC110524501 LOC106613965 coding upstream 138087 72068869 ~ 72097126 (+)
LOC110524507 LOC106613976 coding downstream 404 72239918 ~ 72269866 (+)
LOC110524510 LOC106613977 coding downstream 123338 72362852 ~ 72377582 (+)
LOC110524509 LOC106613979 coding downstream 138268 72377782 ~ 72393450 (+)
LOC110524511 LOC106560226 coding downstream 233603 72473117 ~ 72830580 (+)
LOC110524512 NA coding downstream 589802 72829316 ~ 72830580 (+)
G436017 NA non-coding upstream 18826 72212395 ~ 72216387 (+)
G436018 NA non-coding upstream 23536 72209845 ~ 72211677 (+)
G436015 NA non-coding upstream 63804 72171171 ~ 72171409 (+)
G435801 NA non-coding upstream 229623 72002883 ~ 72005590 (+)
G435716 NA non-coding upstream 386210 71848450 ~ 71849003 (+)
G436049 NA non-coding downstream 17415 72256929 ~ 72260707 (+)
G436059 NA non-coding downstream 40680 72280194 ~ 72284469 (+)
G436051 LOC106613974 non-coding downstream 45129 72284643 ~ 72285257 (+)
G436069 NA non-coding downstream 56732 72296246 ~ 72298469 (+)
G436131 NA non-coding downstream 130084 72369598 ~ 72369995 (+)
ralgps2 LOC106613957 other upstream 548044 71552653 ~ 71687963 (+)
G434829 NA other upstream 936313 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1011635 71218789 ~ 71223578 (+)
G434653 NA other upstream 1275281 70959610 ~ 70959932 (+)
LOC110524423 LOC106613476 other upstream 4021109 68212224 ~ 68214236 (+)
G436403 NA other downstream 263946 72503460 ~ 72504435 (+)
G436588 NA other downstream 755985 72995499 ~ 72995735 (+)
G437327 NA other downstream 1216787 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 2523690 74729349 ~ 74770168 (+)
G438719 NA other downstream 2532495 74772009 ~ 74776469 (+)

Expression


Co-expression Network