LOC118964641


Basic Information

Item Value
gene id LOC118964641
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73037279 ~ 73040402 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051854.1
acagctacggacacagcagctaggtaacacacacacaccctgtctctactggtcacctgtctacagctacggacacagcagctaggtaacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacactgtcactactggtcacctgtctacagctacgaacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtCAGCTGTCTACAGCTACGGacacagcagctaggtaacacacacacaccctgtctctactggtcacctgtctacagctacggacacagcagctaggtaacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacactgtcactactggtcacctgtctacagctacgaacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtCAGCTGTCTACAGCTACGGacacagcagctaggtaacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtcacctgtctacagctacgaacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaac
>XR_005051855.1
acagctacggacacagcagctaggtaacacacacacaccctgtctctactggtcacctgtctacagctacggacacagcagctaggtaacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacactgtcactactggtcacctgtctacagctacgaacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtCAGCTGTCTACAGCTACGGacacagcagctaggtaacacacacacaccctgtctctactggtcacctgtctacagctacggacacagcagctaggtaacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacactgtcactactggtcacctgtctacagctacgaacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtCAGCTGTCTACAGCTACGGacacagcagctaggtaacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtcacctgtctacagctacgaacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacacacacacacacaccctgtctctactggtCACCTGCCTACAGCTACGGacacagcagctaggtaacacgtgttacacacacacacactatcttgtGAAGACCGAATGCTAACAG

Function

NR:

description
LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051854.1 False 1010 mRNA 0.53 3 73037279 73040354
XR_005051855.1 True 990 mRNA 0.53 4 73037279 73040402

Neighbor

gene id symbol gene type direction distance location
LOC110524516 LOC106560230 coding upstream 118548 72875185 ~ 72918731 (+)
LOC110524513 LOC106560217 coding upstream 185965 72833897 ~ 72851314 (+)
LOC110524511 LOC106560226 coding upstream 206699 72473117 ~ 72830580 (+)
LOC110524512 NA coding upstream 206699 72829316 ~ 72830580 (+)
LOC110524509 LOC106613979 coding upstream 643829 72377782 ~ 72393450 (+)
LOC110522997 dhcr24 coding downstream 53248 73093650 ~ 73103407 (+)
LOC110524521 LOC106560235 coding downstream 72918 73113320 ~ 73118094 (+)
mdp1 mgdp1 coding downstream 86230 73126632 ~ 73129571 (+)
LOC110524525 sel1l3 coding downstream 150730 73191132 ~ 73202694 (+)
LOC110524528 cpeb2 coding downstream 446123 73486525 ~ 73513495 (+)
G436595 NA non-coding upstream 36282 73000778 ~ 73000997 (+)
G436592 NA non-coding upstream 38866 72998188 ~ 72998413 (+)
G436516 LOC106560227 non-coding upstream 176263 72858806 ~ 72861016 (+)
G436473 NA non-coding upstream 288778 72746163 ~ 72748501 (+)
G436462 NA non-coding upstream 334829 72701870 ~ 72702450 (+)
G436606 NA non-coding downstream 15498 73055900 ~ 73056733 (+)
G436610 NA non-coding downstream 25098 73065500 ~ 73065729 (+)
G436613 NA non-coding downstream 32914 73073316 ~ 73073692 (+)
G436631 NA non-coding downstream 63231 73103633 ~ 73104048 (+)
G436630 NA non-coding downstream 64722 73105124 ~ 73106233 (+)
G436588 NA other upstream 41544 72995499 ~ 72995735 (+)
G436403 NA other upstream 532844 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 1350110 71552653 ~ 71687963 (+)
G434829 NA other upstream 1738379 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1813701 71218789 ~ 71223578 (+)
G437327 NA other downstream 415899 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 1722802 74729349 ~ 74770168 (+)
G438719 NA other downstream 1731607 74772009 ~ 74776469 (+)
LOC110524571 LOC106560285 other downstream 2130902 75161317 ~ 75178287 (+)
G441903 NA other downstream 4227810 77268212 ~ 77268766 (+)

Expression


Co-expression Network