LOC110522997 (dhcr24)


Basic Information

Item Value
gene id LOC110522997
gene name dhcr24
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73093650 ~ 73103407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110522997
GAGTGGCAGGATTCTAACTTCAATATTCACCCACCTGTCTGTCTATGTAGTGATGtgtgcatttatgtgtgtgtatgtgttggcaTGGATAATGTATGTGGATTTTAAAAAGAAGAAGTTTAGAAATCTTGCATCGCATCCCAACTAAAGGCAATAAAATATCGATTGTTCCTAGAAGGGAGTTATTCTCTGGAACAGTCTTAACTAGACCATCATCAGGCCAGTAGACCAGCAGCGCAGGGAGGATGGATCTGTTGTTGTATCTCGGTTGACTGGTAGTTCTCTTTCTGTTGTGGATCAAGGTGAAAGGCTTAGACTACGTGATCGTTCACCAGAGATGGATATTCGTCTGTCTATTTCTGCTGCCGCTCTTATTACATGCGCGCGTGGCTCATCTTCAAAATGTGTTCCGCGCCAAAACAGCACGACCAGCGCGTGCGGGACATCCAGAGACAGGTACACGtgtggaggaaggagggggggaagACTCTCATGTGTACAGGTCGACctgtctggctgactgtctctctcagagGTGGGAAATACAAGAAGACTAACAAGAACATCATGATCAACATGATGGACATACTGGATGTGGACACACAGAGGCAGGTGGTTCGTGTGGAGCCCCTGGTCAACATTGGTCAGATCACTGCTCTCCTCAACTCCCTGGGCAGGACTCTGCCTGTGCTGCCAGAACTGGACGACCTCACTGTCGGTAACTCCCTGGGCTGGACTCTGCCTGTGCTGCCAGAACTGGACGACCTCACGGTCGGTAACTCCCTGGGCTGGACTGTGCCTGTGCTGCCAGAACTGGACAACCTCACTGTCGGTAACTCCCTGGGCTGGACTGTGCCTGTGCTGCCAGAACTGGATGACCTCACTGTCGGTAACTCCCTGGGCTGGACTCTGCGTGTGCTGCCAGAACTGGACGACCTCACTGTCGGTAACTCCCTGGGCTGGACTGTGCCTGTGCTGCCAGAACTGGATGACCTCACTGTCGGTAACTCCCTGGGCTGGACTCTGCCTGTGCTGCCAGAACTGGACGACCTCACTGTCGGAGGTCTGGTGATGGGTACAGGTATAGAGTCATCCTCTCATATCTACGGACTCTTCCAGCACATCTGTGTTGCCTTTGAGCTGGTGCTGGCTGACGGCAGCCTGGTCCGCTGCACTGAGatcaACAGGATCAGCCTGCACTATAAGCCGTGGTTCTTCAAGCACGTTGAGAGATACCTGACAGAGAACAACACAGCAGTGGAGTACATCCCTCTACGCCACtactaccacagacacacacaatccatctTCTGGGAGCTCcagGACATCATCCCGTTTGGTAACCACCCAGTGTCCCAGTGTTCCGGTGGATGGTTCCTCCTAAGATCTCTCTGTTGAAGCTGACCCAGGGAGAGACCATCTGACAACTGTATGAGCAACACCATGTTGTGCAGGACATGCTGGTCCCCATGAAACACATCCAGACCGCTATCGCACGCTTTCACCAGGACATCCATGTGTACCCTCTGTGGTTGTGTCCGTTCGTGCTCCCCCTGGCCCGGGGGATGGTTCATCCTAAAGGTGAGGAGGCAGAGCTGTACGTGGACATCGGAGTGTACGGAGAACCCAGGGTTAAACACTTCATGTAGACAGCTGGAGCAGTTTGTCAGAGAGGTGCATGGgtgagttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttccagatgCTGTATGCTGATGAGTACATGGAGCGTAGTGAGTTCTGGGTAAAGTTTGTCGGGATGTTAAAATCACCGGAGCTGGGCTGTCGGGACGCTTTCCCTGAGGTATACGACAAGATCTGCAAAGCTGCACGACTCTGACCTGTGACCACTAACCCCTGATCCTTTAACATCTGCCATCCCACTAGTAACACGATTAAGATTAGAGCCTTTAAGGAGTGTTCTCAGCCTGTTTTTATTGTAAAGCCCAGTGAATGTGAATGTGCTGATGAAACAAATACAGCCTTAACACCAGCCTGTTTTGATGTACACTagcgttcaaaagtttgtggtcacttcgaaatgtccttgtttttgaaagaaaagcaaatttttttgtccattaaaataacatcaaattgatcagaaataca

Function

symbol description
dhcr24 Predicted to enable delta24(24-1) sterol reductase activity. Predicted to be involved in steroid metabolic process. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and membrane. Is expressed in cranial ganglion; lens; solid lens vesicle; telencephalon; and yolk syncytial layer. Human ortholog(s) of this gene implicated in lipid metabolism disorder. Orthologous to human DHCR24 (24-dehydrocholesterol reductase).

NR:

description
PREDICTED: delta(24)-sterol reductase

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110522997 True 2140 mRNA 0.50 7 73093650 73103407

Neighbor

gene id symbol gene type direction distance location
LOC110524519 LOC106560231 coding upstream 41100 73007857 ~ 73052550 (+)
LOC118964641 NA coding upstream 53248 73037279 ~ 73040402 (+)
LOC110524516 LOC106560230 coding upstream 174919 72875185 ~ 72918731 (+)
LOC110524513 LOC106560217 coding upstream 242336 72833897 ~ 72851314 (+)
LOC110524511 LOC106560226 coding upstream 263070 72473117 ~ 72830580 (+)
LOC110524521 LOC106560235 coding downstream 9913 73113320 ~ 73118094 (+)
mdp1 mgdp1 coding downstream 23225 73126632 ~ 73129571 (+)
LOC110524525 sel1l3 coding downstream 87725 73191132 ~ 73202694 (+)
LOC110524528 cpeb2 coding downstream 383118 73486525 ~ 73513495 (+)
LOC110524529 LOC106560251 coding downstream 411536 73514943 ~ 73524397 (+)
G436613 NA non-coding upstream 19958 73073316 ~ 73073692 (+)
G436610 NA non-coding upstream 27921 73065500 ~ 73065729 (+)
G436606 NA non-coding upstream 36917 73055900 ~ 73056733 (+)
G436595 NA non-coding upstream 92653 73000778 ~ 73000997 (+)
G436592 NA non-coding upstream 95237 72998188 ~ 72998413 (+)
G436631 NA non-coding downstream 226 73103633 ~ 73104048 (+)
G436630 NA non-coding downstream 1717 73105124 ~ 73106233 (+)
G436632 NA non-coding downstream 3704 73107111 ~ 73110492 (+)
G436556 LOC106560237 non-coding downstream 28952 73132359 ~ 73133674 (+)
G436640 LOC100194696 non-coding downstream 76229 73179636 ~ 73180778 (+)
G436588 NA other upstream 97915 72995499 ~ 72995735 (+)
G436403 NA other upstream 589215 72503460 ~ 72504435 (+)
ralgps2 LOC106613957 other upstream 1406481 71552653 ~ 71687963 (+)
G434829 NA other upstream 1794750 71298615 ~ 71298900 (+)
G434792 LOC106613943 other upstream 1870072 71218789 ~ 71223578 (+)
G437327 NA other downstream 352894 73456301 ~ 73495084 (+)
LOC110524560 LOC106560270 other downstream 1659797 74729349 ~ 74770168 (+)
G438719 NA other downstream 1668602 74772009 ~ 74776469 (+)
LOC110524571 LOC106560285 other downstream 2067897 75161317 ~ 75178287 (+)
G441903 NA other downstream 4164805 77268212 ~ 77268766 (+)

Expression


Co-expression Network