Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964643 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 74354175 ~ 74356972 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051857.1 | True | 768 | mRNA | 0.38 | 4 | 74354175 | 74356972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524554 | LOC106560267 | coding | upstream | 232430 | 74119478 ~ 74121745 (+) |
| LOC110523001 | spata18 | coding | upstream | 330829 | 74017374 ~ 74023346 (+) |
| LOC110524552 | LOC106584107 | coding | upstream | 358437 | 73974430 ~ 73995738 (+) |
| ociad1 | LOC106560260 | coding | upstream | 385294 | 73955666 ~ 73968881 (+) |
| zar1 | LOC106560258 | coding | upstream | 501856 | 73846843 ~ 73852319 (+) |
| LOC110524555 | NA | coding | downstream | 3805 | 74360777 ~ 74383682 (+) |
| LOC110524557 | LOC106560354 | coding | downstream | 266079 | 74623051 ~ 74624589 (+) |
| LOC110522886 | pdx1 | coding | downstream | 271455 | 74628427 ~ 74630673 (+) |
| LOC110523003 | LOC106560269 | coding | downstream | 281174 | 74638146 ~ 74662449 (+) |
| LOC110524560 | LOC106560270 | coding | downstream | 372377 | 74729349 ~ 74770168 (+) |
| G438064 | NA | non-coding | upstream | 147846 | 74204238 ~ 74206329 (+) |
| G437996 | NA | non-coding | upstream | 241400 | 74112384 ~ 74112775 (+) |
| G437638 | NA | non-coding | upstream | 267429 | 74086544 ~ 74086746 (+) |
| G437631 | NA | non-coding | upstream | 278478 | 74075388 ~ 74075697 (+) |
| G437626 | NA | non-coding | upstream | 282937 | 74071037 ~ 74071238 (+) |
| G438230 | NA | non-coding | downstream | 135992 | 74492964 ~ 74495183 (+) |
| G438445 | NA | non-coding | downstream | 157629 | 74514601 ~ 74514830 (+) |
| G438446 | NA | non-coding | downstream | 159284 | 74516256 ~ 74516475 (+) |
| G438451 | NA | non-coding | downstream | 163133 | 74520105 ~ 74520340 (+) |
| G438453 | NA | non-coding | downstream | 164105 | 74521077 ~ 74521488 (+) |
| G437327 | NA | other | upstream | 859091 | 73456301 ~ 73495084 (+) |
| G436588 | NA | other | upstream | 1358440 | 72995499 ~ 72995735 (+) |
| G436403 | NA | other | upstream | 1849740 | 72503460 ~ 72504435 (+) |
| ralgps2 | LOC106613957 | other | upstream | 2667006 | 71552653 ~ 71687963 (+) |
| G434829 | NA | other | upstream | 3055275 | 71298615 ~ 71298900 (+) |
| G438719 | NA | other | downstream | 415037 | 74772009 ~ 74776469 (+) |
| LOC110524571 | LOC106560285 | other | downstream | 814332 | 75161317 ~ 75178287 (+) |
| G441903 | NA | other | downstream | 2911240 | 77268212 ~ 77268766 (+) |
| G442273 | NA | other | downstream | 3201358 | 77558330 ~ 77583227 (+) |
