LOC118964646


Basic Information

Item Value
gene id LOC118964646
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75225463 ~ 75228018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051861.1
TCTGGGTAGAGCAAGGCTGTGTTCAGTTGGCACCAAACGTGGGTGTTTTGAAAAGGAGTGAAAGGAAGAGGTACTAACCCCCACAATAATACGACTCAGATCCCTGTGGGTGCAGACCTTTGTTGCAGCCTAGCAGTAACCCATCTGTTTTCACAAACTGATATTAGTCACTAAAACCGCTGGGCCTCGAGGAGGACCCCCCTCAAGCTAATGAGCAGTAATTCTGACTGCCACATTCTAACATtgtaattaatacatttcatatatgcTATCAAAAAGTAATAATTTGGTTTATGCAGGTCTTAGGTAACATTAGAATACGTTTTTTTTATAACACAATATCATTTTCATTAGTTTAGTGTTTTAGGCTCTATGTAAAAACGCAACACAAATTTAAGTGTTCGATCCATTTTATTCGTAGTCTTATGTTACAACTATGAAACGGAAGGCCTATGAGTTGGGACGAGGTAACAACTTGTTTTAATAACATCCTAAATCTAAATAATCAGTAGCCTAAACATACTTGTGCTTGATAAATATTGATAAATATTGAATATTGTCACAAAGCAATAATAGCATGTTAACTTTCTCAGTATGACCGCAGTCCTAAATTGTTAGCTCGCGCTTACATGGTGTCATATAAACAACAAGACGTTGCTGATATTGTTTTTTGCTTGTTGTGTAGGGTCTGCTTTCTGATGACATTTTGTTCTAAGATTGTCACAGTCTTATTTTATCTAAACGGtgctgtcctctcctgtctcagtTTCATTTGGTGGTGGCTCGGGCACCTTCTCAGGGTGCACCGTTCAGACTTTTTTACGCTTAAGCCTCGAGGGTGTAGGTTCAGGTTGAGGCCCAGAATAATAATCATCAGAGATGTCATGATTAATTTCTTCCCTGCCGTCGGAGTCATTTTCATTCAGATTTTGTAGCAACGCTAACGCAGCATGTGCATCCATTCGTCTTGGTCCATTACGCACGCTTTCACTGTGTACTCCAAGTAGGCCAGAGTGGACTGATAAGACTGCGTGATTTGGTGGACTAATATAGGGGACATATCATTTAGAGATTATAAATAGTAGATAAATACAGTAGAATGGCCTGCCCTGTTTTTCACTGACAATTGGTGATTACATAATTATGCATTGTTCGCTTCCCTGCGCTCATCCACTCTTCTTCCAACTGGGCACAGCACCTTCAATGCTCGGGAGAAGTAGGGGCAACGGGGAAAAACCCACAAACTTAAATGACATACCCTCCTAAATCTGGTTATAACTCCAGTTCTGTTTGCGATATTAAGATTCTAGCGACAGTGTGTTGTAGAACCTTTTAGGAAATGTCAAGTACGGAGGGGACATGATGGCAGAGTAATAATTTTATTTAAATTCATGGGCAGTCCAAATTACTGCTTTAGCGGTTCTAGTGATAACTGATACAAATGACAGAACCCACACTGGCCTTCTGTAAGACAGTATTGTTCTCGCTTAAAAAATGTAAACTTACCAGTCGTTTATTGTAAACAAAAGTGACCCCCTTCTCTATTTGACAGGAATTTCCCCCTCAGGCTGTCAGAGGTAGAATCCTGCATCGGGTCGGATACCCATGGCTACCTTATCGGTGAGCCGCAAAAATATCAACTTGTGGGTGAAATGAACATTCTGTCAACACGTGGGTCGGGTCGTGGTTCAGAACAATTACATTGTCGGCTGAAAACATTTTAAATCAAGATAATACACTTCTTTTTTTTAACCCAGGAGCTTATTGGGTTGAGACAAGGCTTTCAGCCATGCACGCTTTGAGTGTGTGTGGAGCTGGGAACTGTCCCTTATTTGTGTGGTGCCAAAAAATTCTAATTTGTCCACATGCAGGGATCATGTTCCCTCTCCTCACGTGAGAATAGGCTATATAACGTGTAAACCAATGCGGCTGTTAAGTTTGATAAGCCTACTAAGTAAATGTAGCCTATTTTTGCAACCTATAGTCGGTTCTGGGAATGGTTTAATTAGGCCTAAACTATTTGATCATCTAAACAATATTTAATCTAAAGGTATTGTTTTAGGACAGCTATTGGGTTTCATCACAGTTAAGAAGGCTAATTAGAAGGCTCTTTCAGTATTTTAAGTGACTTGTTGCATTGtgaaaatgaaaatatatttttcttaatTCATGGTATGGTTTCTGTTTATCCAAATGTTGAATAGACATGCAGACAAATGAATTAATGCAGGGAAGGGGATTAAAAATAATTATGCCTACTACTCTGGAGttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051861.1 True 2274 mRNA 0.39 2 75225463 75228018

Neighbor

gene id symbol gene type direction distance location
LOC110524570 LOC106560285 coding downstream 16401 75171277 ~ 75209062 (-)
LOC110524568 LOC106560284 coding downstream 76997 75112019 ~ 75148466 (-)
LOC110524567 LOC106560283 coding downstream 125943 75045027 ~ 75099520 (-)
LOC101268909 LOC101268909 coding downstream 133830 75082466 ~ 75091633 (-)
LOC110524566 NA coding downstream 176038 75048445 ~ 75049425 (-)
LOC110524573 LOC106560289 coding upstream 9523 75237541 ~ 75296608 (-)
LOC110524574 LOC106560290 coding upstream 71077 75299095 ~ 75333476 (-)
LOC110524577 LOC106560293 coding upstream 133618 75361138 ~ 75528550 (-)
LOC110524579 LOC106560296 coding upstream 385572 75613590 ~ 75624467 (-)
LOC110524580 rgs16 coding upstream 430514 75658532 ~ 75660672 (-)
G439571 NA non-coding downstream 10460 75214763 ~ 75215003 (-)
G439076 NA non-coding downstream 225564 74993136 ~ 74999899 (-)
G439065 NA non-coding downstream 260326 74964761 ~ 74965137 (-)
LOC110523004 NA non-coding downstream 262978 74961377 ~ 74968484 (-)
G439574 NA non-coding upstream 3587 75231605 ~ 75232553 (-)
G439653 NA non-coding upstream 119530 75347548 ~ 75351451 (-)
G439654 NA non-coding upstream 153745 75381763 ~ 75382090 (-)
G439002 NA other downstream 297666 74865259 ~ 74927797 (-)
LOC110524526 LOC106584218 other downstream 1815124 73370439 ~ 73421683 (-)
G437079 NA other downstream 2078335 73146358 ~ 73147128 (-)
G437074 NA other downstream 2100425 73122112 ~ 73125038 (-)
G439594 NA other upstream 35455 75263473 ~ 75265403 (-)
G439788 LOC106560295 other upstream 343231 75571249 ~ 75575569 (-)
G441168 glrx2 other upstream 1358440 76586458 ~ 76590370 (-)
G441483 NA other upstream 1674364 76902382 ~ 76902771 (-)
G441630 NA other upstream 1785981 77013999 ~ 77021375 (-)

Expression


Co-expression Network