LOC110524576 (uhmk1)


Basic Information

Item Value
gene id LOC110524576
gene name uhmk1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75332453 ~ 75347896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604374.2
atgatTCTTTAAACTatatcctccccttcatctacactgattgaagtggatttaactgtTGATATCAATAAGGATTATaattttcacctggtcagtctgccgTTAGAgttggtgttcctaatgttttgtacacagtgtatatttagtttgtgagtgtgtgatatgggGGTTGGAGACATGTTTATTTTTACATTACAAAGACAAACTTGTATAAACAATGTCAACACCGCCATGTTGCactgagccttgctgttggaaaaccacatcaGTGTCTGACTCCACTCTTCGACTTTTGTCTACAGCAGTTTGCTTTCGCGTGACTACTCAAACGAGCTCAAGGTTagggggtagggacgtcccaataATCCCAATAGCACTAACCATTTAATGACGGCTGCTGCTTCCGGGAAGATGGCCGGCTAAACAATGACAAAATATACCATTCTACAAATCAAGAAGGGATCATCTTTCGCTTTTGCAAACTACTTGGATTAACCAAAGTGTTCGGAATAAATGCTTGCATTTAGGTAGTTTATTTGGTAACCGTGTGCATGCATGTTAAATTACTGTTTGAGTTAGCTAAATTAGTTAGCACATGCGAAGTAGCTAACATGTCAGCTATTGGTAGCTAAAGTTGAAACCCGCAACTGACGTATTATTGAGTTCCATGAtcgagaaatggagaggagacagacacgtTTACATTGCTGGCTAGTGTCGAAACGTGCGATATTTTTTTTTATCGGTGTGTCTCGTTGGTCGATTGCTATGTTCCCGCAGCTGCATACAACTGTCTAAaacttaactagctagctaattttcATTGATTCACTCATTTCAATGGCTCACTGTAGTTCATCGGATCCAAGTGGGAAGATACCCCGTCCAGATAGTAGCGCAGTATTGATGGCAGGATCTCCCGGAACCGTTGATCAGGCAATGAAGCCGGTGTTGTTTGAAATATTTGGAGAAATTTGGAACGTCCAGGCCCGACTCGGGCAAGGCGTCTCGGCCTCGGTATACCGGGTGAGCTCGGGAAGGACGAGTACGGCCGCCGTTAAGGAGTTCCTGGCGGACGCTCAGGGCGGAGATTACGGGTACCACAAGGAGAGGTCCGTGCTGGAAGACATCCAAGGACACAAAAACATCGtaACGCTATATGGGGTGTTCACCAACCACAGCCATGTGGGTGTGGCCACACGCTGCCTGCTGCTAGAGCTGCTGGATGTTAGTGTGTCTGAGCTGCTGGTTAGTACCCAGGGCCAGGTGGGCAGTGGTGGTGCCCAGCAGCAGGGCCACTCCATGTGGCTGGTGCAGCACTGCGCAAGAGACATCCTGGAGGCCCTGGCCTTCCTCCACCGAGAGGGCTACGTCCACGCAGATCTCAAGCCCCGCAACGTGCTCTGGAGCGCAGACGACGAGTGCTTCAAACTCATCGACTTTGGACTCAGCTTCAAGGAGGGTAACCAGGATGTGAAGTACATCCAGACGGATGGGTACCGTGCGCCGGAGGCTGAGCTTCAGAACTCGCTGGCCCAGGCGGGGCTGGAGGCGGAGGGTAACTCTGGCTGCTCGGCCACTGTGGACCTCTGGAGCCTGGGTATCATCCTGCTGGAGATGTACTCCGGCATCAAACTCAAAGACATTGTCAGGTCACCCAAGTGGAAGGACAACAGTGCAGCGATAGTCGACCATATCTTTGCCAGTAACAGTGTGGTGTGTCCTGCTATCCCTGTCTATCACCTCAGAGACCTGATCAAGAGCATGCttcacaatgaccccaagcacagaGGCACAGCTGAGACGGCCCTGCTTAGCCCTTTCTTCAGTATTCCCTTTGCTCCTCACATAGAAGACTTGGTTCTGCTGCCCTCGCCTGTTCTGCGCCTGCTCAACCTGATTGACGACAGCCACCTACACAATGAGGAGGAGTATGAAGaCATCTTGGAGGACATGAAGGAGGAGTGCCAGAAGTACGGCTCTGTGGTCTCTCTTCTCATTCCCAAGGAGAACCCAGGCAAAGGACAGGTGTTTGTAGAATATGCTAACGCAGGCGACTCCAAAGAGGCCCAGAGACTGCTGACAGGACGGACCTTTGACAGGAAGTTTGTCGTTGCCACATTCTACCCCCTGAGTGCTTACAAGAGAGGCTACTTGTACCAGACCGtgcagtgaacacacacacacacgcgcactgaGAGCTCACACACCGTTAGTTGAAGCGCCTAGGCCCCATTCAGTCAGTCTCTGTCATGGTGTgtatacttacagttgaagttggaagtttacatacacttaggttggagtcattaaaactcatttttcaaccactccacacatttcttgttaacaaactatagttttggcaagtcagttaggacatctac

Function

symbol description
uhmk1 Predicted to enable protein serine/threonine kinase activity and ribonucleoprotein complex binding activity. Predicted to be involved in peptidyl-serine phosphorylation; positive regulation of translational initiation; and regulation of protein export from nucleus. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in neuronal ribonucleoprotein granule and nucleus. Orthologous to human UHMK1 (U2AF homology motif kinase 1).

NR:

description
serine/threonine-protein kinase Kist

GO: NA

KEGG:

id description
K08877 UHMK1, KIS; serine/threonine-protein kinase Kist

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604374.2 True 2387 mRNA 0.49 8 75332453 75347896

Neighbor

gene id symbol gene type direction distance location
LOC110524571 LOC106560285 coding upstream 160632 75161317 ~ 75178287 (+)
LOC118964645 LOC106583873 coding upstream 263708 75061181 ~ 75068745 (+)
LOC110524564 LOC106560280 coding upstream 291076 75031789 ~ 75041377 (+)
LOC110523005 LOC106560277 coding upstream 314602 74972063 ~ 75017851 (+)
LOC110524562 exoc1 coding upstream 386383 74932150 ~ 74946070 (+)
rgs4 LOC106560295 coding downstream 213282 75561178 ~ 75572148 (+)
LOC118964720 LOC106576333 coding downstream 914398 76262294 ~ 76264534 (+)
LOC110524585 LOC106560359 coding downstream 1191096 76538992 ~ 76541623 (+)
LOC110524586 LOC106560300 coding downstream 1215593 76563489 ~ 76566464 (+)
LOC110524588 LOC106560302 coding downstream 1226478 76574374 ~ 76576547 (+)
G439222 NA non-coding upstream 86448 75245732 ~ 75246005 (+)
G439220 NA non-coding upstream 91995 75237647 ~ 75240458 (+)
G439218 NA non-coding upstream 99893 75232147 ~ 75232560 (+)
G439190 NA non-coding upstream 102479 75227909 ~ 75229974 (+)
G439189 LOC106584137 non-coding upstream 108412 75220212 ~ 75224041 (+)
G439292 NA non-coding downstream 21607 75369503 ~ 75369741 (+)
G439293 NA non-coding downstream 25781 75373677 ~ 75374168 (+)
G439295 NA non-coding downstream 36807 75384703 ~ 75385015 (+)
G439297 NA non-coding downstream 40789 75388685 ~ 75388961 (+)
G439306 NA non-coding downstream 47837 75395733 ~ 75395997 (+)
G438719 NA other upstream 555984 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 562287 74729349 ~ 74770168 (+)
G437327 NA other upstream 1837369 73456301 ~ 73495084 (+)
G436588 NA other upstream 2336718 72995499 ~ 72995735 (+)
G441903 NA other downstream 1920316 77268212 ~ 77268766 (+)
G442273 NA other downstream 2210434 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 2897943 78245839 ~ 78288092 (+)
G445204 NA other downstream 4868582 80216478 ~ 80217090 (+)
G445211 NA other downstream 4886984 80234880 ~ 80235428 (+)

Expression


Co-expression Network