rgs4 (LOC106560295)


Basic Information

Item Value
gene id rgs4
gene name LOC106560295
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75561178 ~ 75572148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604376.2
GAGATTTCACCAAGACACAGCATACCACTGAAACACTGTGAGGACTAACAGTCATACTATTACAGACTTCTCCTCTTAACTCCAAACCACTGCAAATAATTTTCCTAGATTTGGATTGAGCAAACATACAACATGTGTAAGGGATTAGCAACACTGCCAGCAACCTGCTTAAAAAGtgCCAAAGACATCAAACACAAGATTGGCTTTCTGCTCCAGAAGCCTGAGTTTCCAACAGACCAGAAACAGGTCAAAGAGAAGACAACCGCTGTCAAGAGAGTTTCACCTGCTGATGTGGAGAAATGGAAGCTGTCCTTCAACAACCTGATGAATTGTGAAAgTGGTCGTACAGTGTTCACTGCGTTCCTGAAGTCAGAGCTCAGCCAGGAGAACTTGGAATTCTGGAACGCTTGCGAGGAATACAAAAAGTCTTCCCCAAACAAGATGGCGGCCAAAGCTAAAGAGATCTACGAACAGTACATTGAGGCAGACTCTCCAAATGAGGTGAACCTGGACTCAGCAACGCGAGAGGAGACCAGACAGAACCTGTCTATTGCCGGCTTATCCTGTTTCAATGACGCCCAGCAGAAGATCTTCAATTTGATGGAGAAAGACTCATACAGAAGGTTCCTCCACTCCAAACTGATCCAGGATCTGTCCCTGTTGAGCACCACCACCCCACTCTGTGCACTGAAGAAGATAGGAGGAAAAATAGTCTGTTCTGAGAACAGATGTGGTGCatagatggagatggagagagaaacaaggaCGGATTGAAGAATGTGTAACATTTTGTCAATCTGTGAGGGAAAGAGCAGGTAGTCTTGAAGAGAAAACATTATTATGAGTGGGTGGGGTTTTATTTTTTCTGTCCATTGTTCCAGATAACCATTTCAACACGCATCACAAATAGATTATTTTTGAGACGAGGGGAcaattggagagggagagaactgtCAAGAGTTATTTTTCAGGAGAAATATGCTCCTGAAAGGATGTTCCATTCTCTGATTTTCATTGTTGTGCGAGGGTCTGCTTTCTTTACACTGAACATCTTCCAGATCTCTAAAAATATTCAAATGGTTCAAACAAGCATTTAGGTATTTCACCCTGGCTAGTTCCCTGTGTCCCCTCTGTCTGGTTTTAATCAAGGGCTCCATGCTAAGTCATGCTTAAACACCAATAATGAAAATGCACTTCTTCAAACTGAGTGTTAAATTAGATGATAGTTTCCGAATGGATTGGTGTTAAAAAACTTCTTTCACCTGACTGTTGTTTGTTTgactctgtttttctgtctttaCTTTACCTGTGGCCAGTTCATGCACTGTTAAGGTGTAACTCACTGGCCTTCTGTTAACCTGACAACAAAGTCATGACTAGGTGATGTTTTGATTCACAACACAGGG

Function

NR:

description
regulator of G-protein signaling 4-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0031018 endocrine pancreas development biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604376.2 True 1406 mRNA 0.42 5 75561178 75572148

Neighbor

gene id symbol gene type direction distance location
LOC110524576 uhmk1 coding upstream 213282 75332453 ~ 75347896 (+)
LOC110524571 LOC106560285 coding upstream 389357 75161317 ~ 75178287 (+)
LOC118964645 LOC106583873 coding upstream 492433 75061181 ~ 75068745 (+)
LOC110524564 LOC106560280 coding upstream 519801 75031789 ~ 75041377 (+)
LOC110523005 LOC106560277 coding upstream 543327 74972063 ~ 75017851 (+)
LOC118964720 LOC106576333 coding downstream 690146 76262294 ~ 76264534 (+)
LOC110524585 LOC106560359 coding downstream 966844 76538992 ~ 76541623 (+)
LOC110524586 LOC106560300 coding downstream 991341 76563489 ~ 76566464 (+)
LOC110524588 LOC106560302 coding downstream 1002226 76574374 ~ 76576547 (+)
LOC110524593 LOC106560306 coding downstream 1037821 76609969 ~ 76639478 (+)
G439328 NA non-coding upstream 134078 75426838 ~ 75427100 (+)
G439322 NA non-coding upstream 144458 75416502 ~ 75416720 (+)
G439321 NA non-coding upstream 144743 75416225 ~ 75416435 (+)
G439320 NA non-coding upstream 145262 75415700 ~ 75415916 (+)
G439319 NA non-coding upstream 146539 75414303 ~ 75414639 (+)
G439452 NA non-coding downstream 41456 75613604 ~ 75616314 (+)
G439476 NA non-coding downstream 79657 75651805 ~ 75684778 (+)
G439480 NA non-coding downstream 86404 75658552 ~ 75659371 (+)
G439511 NA non-coding downstream 141200 75713348 ~ 75713675 (+)
G439526 NA non-coding downstream 158613 75730761 ~ 75730960 (+)
G438719 NA other upstream 784709 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 791012 74729349 ~ 74770168 (+)
G437327 NA other upstream 2066094 73456301 ~ 73495084 (+)
G436588 NA other upstream 2565443 72995499 ~ 72995735 (+)
G441903 NA other downstream 1696064 77268212 ~ 77268766 (+)
G442273 NA other downstream 1986182 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 2673691 78245839 ~ 78288092 (+)
G445204 NA other downstream 4644330 80216478 ~ 80217090 (+)
G445211 NA other downstream 4662732 80234880 ~ 80235428 (+)

Expression


Co-expression Network