LOC110524579 (LOC106560296)


Basic Information

Item Value
gene id LOC110524579
gene name LOC106560296
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 75613590 ~ 75624467 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604378.2
CTGTATATAAACTCCCCAAGAGTGCTGAAGGACAAAGTCAAAAAGAAAAGGGACTCTGAATCTTACGGTGGTGGACTCACTCAACAAAACATCAAAAAGGAAAACTTCATAaaatgtgtaaaggattagctgCGTTGCCCCAAACATGTCGGATAAGGGCTAAAGAGATCAAGTCTAAGTTGGGGGTTCTCCTCCAGAAGCCTGAGAATGGCATTGACCTGATCATCCCATACCCAGAGAAACAAGAGAAGAAGCCAGAGAAGCTTCAGAAGCCCATTCCTGAGGAGGCTTCTCAGTGGCGTGAGTCCCTGGACCATGTGCTGACCAACAGTTGTGGCCTGGCCATGTTCCGTAGCTTCCTGCGCTCTGAATTCAGTGAGGAGAACATTGAGTTCTGGGTGGCCTGCGAGGACTTCAAGAAGATCAAGTCTTCCATGAAGATGGCTGTGAAGGCAAGGAAGATCTATGAGGACTTCATCCAGACCGAGGGACCCAGAGAGgtgaaCATTGATCATTACACCAAGGATGTGACCCTGAGGAACCTGGTTGATCTTTCCCCGGGGACCTTTGACCTGGCCCAGAAGAGAATTTATGCTCTGATGGAGAAGGACTCCTTTGGCCGCTTCCTGAGATCTGAGCAGTACCAGGAGCTGGTCAAATAAGGAGATGATCACAGAATAAGGGTCAATTCCAAACCAATTGGATGTCATTTGAAGTGGATGGAATTAGGCCTTTTTTAAATAATTTGATGCAATTGACACAAGCGAGACTGCAGTTTTGATAACTAAGGGCAATCATAAAGATTTCTCATTCTATACCAACTTAAATCTATATTTCAAATGACTTCTATATTTGTCTTATCTACCTGCAGCCAATCAAAATGTCACATGTCAATTCAAAAAGTAAAGAGTGTGGAACATGCATTATGACAGTATTTGTTAAATGAGAGACAAACAAACCACCAATCAATTAAACAGTGATTTAAAGAAATACATTGGAAAATCACAATCTCTTGGGAAGATTTACCAAAGGTCACAAATATTGCAGACAAAATCTCTCGCAATCATTTTGTCCCATAGTCTAAATAAAAAGGAAGATCCTAGACAGACAAATAGACACACCATATTTGTACATCATAGCTTTCCCAGAAAAAAAACTGAAGTGGCTTTCAGAGTTTCTGGAGAGAACAATCTGACCTCTGCCTTGAGACTCTTAGTGACACATCCAGTACCCATCAAGTGTTCTAAATAGGGGAGAACGGGTGAGGGACTTGGCCAACCTAGCGTTCACACAGCCAAGTGATAAACAGTTTAAAAACAACAGACATAGAGACCAAGTGTCTTGAGTAGCTGTGAGTTGGCTCCAACGTGCTCTCAGGCCATCCTTGGGATCAGTGGTAGGCAGTTTGTTCAGTGGTTCATGGGCCACTGCATTGTAAGTTGCTAAAATGGGAAAACCAAGTAGGGGTGGATCTCAGAAAAGAAAATCACTCAGTATTTTCTCCAGATAATTATTTTTTACCCATTTGAACTAAGTAGGCATAAATTATTCCATTTTAGGTCATTTCAGCCATTCATTTCACCTACAGATGGTCATGAAGCaaaggagatgaggaaaggaaACACGCAATACAACAACATTTTAACGCTTAGGCACTTTACTAACTTAATCGAAGAGAAAGATATGCACTCAATTATTGACTAACTAATCTCATCCGGTATTTCAATACAGCTTTCGGCATTTCTGTTTGTCACTAACCATTCACTATAATAACTAGCCTTCACACCTTTTATAGTCAGAGAAGTATATGGTTTTGAGGGTGGAGGTCTTTGGTTATGCAAAGGTTCTCTCAGTCCCATGTAGCAATAATATATCACTACCTTACAGTGTGTTTTTATAATGCTCTTCTGTGTTTTTATGTATTTAAGAAGTGCAGCTGTCATAGCCATATCATTGAAGTACTATTACACAAATACTCAATACCTTAATAAGTCCTTATTGTTGCCCAATACAGCATTATTTGACTTTCTGCAACACTGCAGGTCAGGAGTTGACAATTGTGGTCATTTTAATTAACTGATTTTCCCATGTATTTTCACTTGAAGCTAAAGTGACAAAATGTTAGATCACATACTTTGTAATCACTTGACATCATATAGTAATTTAAAGTTTAGTAACAATACCAACACAAAAAACATGTTTCTAAAGTGGCATTGATAAGGGTATCCAGTTGCATAGATTGGCCAATCTACTGCTATTGCCCAAGGTGTCATGCCTTTAGTGAAAACACTTGATGAAAACATCAGTAAGGACTTATGTGGTGCTAAGTTAATATCTGACTCATACAGTCTGTGCATGTATTATTTGTAGTCACCCACATAAAAGGCATACATTAAATTCCTgaagatgtatttattttccatgtCAATACAGTATCTACCAGTATTTAGTAGTATTTGTGTTGATTAAGTTATTCATGACTACCCCATTGGAATTCATGGGAGTTGTGGCCAAGAGAGCACCGGGGTCCAGGAGAATCTAGGAGAGGTCTGTCTTTTCATTGTCATAAAAGAGAAAACATCTGACTA

Function

NR:

description
regulator of G-protein signaling 5-like

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604378.2 True 2588 mRNA 0.40 5 75613590 75624467

Neighbor

gene id symbol gene type direction distance location
LOC110524577 LOC106560293 coding downstream 85040 75361138 ~ 75528550 (-)
LOC110524574 LOC106560290 coding downstream 280114 75299095 ~ 75333476 (-)
LOC110524573 LOC106560289 coding downstream 316982 75237541 ~ 75296608 (-)
LOC110524572 LOC105011858 coding downstream 383553 75220206 ~ 75230037 (-)
LOC118964646 NA coding downstream 385572 75225463 ~ 75228018 (-)
LOC110524580 rgs16 coding upstream 34065 75658532 ~ 75660672 (-)
rgs8 LOC106560297 coding upstream 47246 75671713 ~ 75706466 (-)
LOC110523006 LOC106560358 coding upstream 115643 75740110 ~ 75743709 (-)
LOC110524582 LOC106560298 coding upstream 257762 75882229 ~ 75954489 (-)
LOC110524583 LOC106560299 coding upstream 664454 76288921 ~ 76324868 (-)
G439691 NA non-coding downstream 186419 75426944 ~ 75427171 (-)
G439690 NA non-coding downstream 187064 75426147 ~ 75426526 (-)
G439687 NA non-coding downstream 192886 75420385 ~ 75420704 (-)
G439686 NA non-coding downstream 194036 75419340 ~ 75419554 (-)
G439685 NA non-coding downstream 194981 75418252 ~ 75418609 (-)
G439870 NA non-coding upstream 89095 75713562 ~ 75713846 (-)
G439875 NA non-coding upstream 94366 75718833 ~ 75719041 (-)
G439887 NA non-coding upstream 111602 75736069 ~ 75736291 (-)
G439927 NA non-coding upstream 135531 75759998 ~ 75760201 (-)
G439929 LOC106581772 non-coding upstream 137029 75761496 ~ 75761708 (-)
G439788 LOC106560295 other downstream 38021 75571249 ~ 75575569 (-)
G439594 NA other downstream 348187 75263473 ~ 75265403 (-)
LOC110523004 NA other downstream 649894 74961377 ~ 74968484 (-)
G439002 NA other downstream 685793 74865259 ~ 74927797 (-)
LOC110524526 LOC106584218 other downstream 2203251 73370439 ~ 73421683 (-)
G441168 glrx2 other upstream 961991 76586458 ~ 76590370 (-)
G441483 NA other upstream 1277915 76902382 ~ 76902771 (-)
G441630 NA other upstream 1389532 77013999 ~ 77021375 (-)
G442115 NA other upstream 1782275 77406742 ~ 77407135 (-)
G442381 rpl5 other upstream 1998832 77623299 ~ 77627214 (-)

Expression


Co-expression Network