LOC110524588 (LOC106560302)


Basic Information

Item Value
gene id LOC110524588
gene name LOC106560302
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 76574374 ~ 76576547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604393.2
ACACTAACCAGCCAATCACATTCCCTAGCACTGCCTTTTTCTCCCTCAGGCTCTTACCATCAGCGGATGGCCTAGTCAACTGTTTACATAGAGTGGGCCAATCAGGTTACAGATCTGTTACTCTAGTCTAGGCCCACCTTTCTAGCATGACGATATCAGAGAGAAACTATAAAGTGCTCTGACTGCTCTAGAGGGAGGTAGATTAACTTGCTTGCTATAGTCAGGACTATATTCAGTGTTTCCCCACAGAATCATGAGAGAGTGTGTTGTATCAGAAAGGGACATGGCGTGTACAGACTGTATGAAGGCATCGGATTTCTCTATTGATACAAAAGGAATCAAGAAAAGAAATTGGAGGACAAGGATACGCTATCTTTTGAAGATCacctcttctttttcttcttcaaaATGCATGGCAGGAAGATCTTACAGGCCAACAGTGGAGGAAGTCAACCAATGGGCACAGTCACTTGACAAACTCCTGAGTCACAAATATGGAAAGGCAGCGTTTCAGATATTCCTAAAGTCAGAGTTCTGTGATGAGAACATAGAGTTCTGGACGGCCTGTGAGGAGTTCAGGACCATGACGTCTCTAGGGAAACTGTCGTCGAGGGCCAGAACCATCTATGAAGAGTTCATCCAGTGTGATGCTCCTAAAGAGATCAACCTGGACTACCAGACGAAGGACGCTATCATCCAGAGCCTGCGTCTGCCCAGCCTGACGTGTTTCCTGTCGGCCCAGAAGAAGGTGTTTAACCTGATGGAGAACAACTCGTACCCTCGCTTCATCCACTCTGAGCTCTACAAGGAACTGTGTGCCGTCGCCAGGGGAGAGGGGAAATATCTTTAAGATTACTACTCGCAAGGATTGACTATGTAGTCAAGCATTACATGAAGTTACATGGAATGTAAAACCATTTCACATTTGAGCCATGTGGCCATTGGCAATGCTGTAGCGCACTATTTAtaaacagtactgtagtgtaggaAGTACAGCGAATAACTAGCTGTAAATGGCTTAGCCTTTACACTTGAAAAATGTTCATTCAACTGTGCATCCTTGGTTTTGCAGAGTCAGCCAAAACAACACCGGGACCTTTGTGCACATGATTATGCAGATCAGATGTAAAGTTGTTTTGTTATTGGCTCAAAATGGAATTGCTTATCCAGTTGTTTTTGAATGCACTTTAGTCAGTTTCACCAAACACCAGTACCGGTAAATAACTGGCTACTAACTATTTGCAATTGATTGTATACGATGTGCGCAAGTACTTTCTGGGACCAGTCATATAGGTTTACATTGGCAACTGTTTTGCTGGAGAGGTGAATGGAGGTGAATGTTTTGCATTGCATAGAGGTGTTTACACTAAACATTGTAGCGGAAATGGTTTTAACCATTCCAATGAGTTCCGTTCATCGTGGGTGCAGCTGGACTGCAACACTATTGTTTTTCCTTATTTATCGTTTGTTAAATACATACAtgtcaaataaaataatgttGAATTCAGAAAC

Function

NR:

description
regulator of G-protein signaling 21-like

GO: NA

KEGG:

id description
K18154 RGS2; regulator of G-protein signaling 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604393.2 True 1512 mRNA 0.43 5 76574374 76576547

Neighbor

gene id symbol gene type direction distance location
LOC110524586 LOC106560300 coding upstream 7910 76563489 ~ 76566464 (+)
LOC110524585 LOC106560359 coding upstream 32751 76538992 ~ 76541623 (+)
LOC118964720 LOC106576333 coding upstream 309840 76262294 ~ 76264534 (+)
rgs4 LOC106560295 coding upstream 1002226 75561178 ~ 75572148 (+)
LOC110524576 uhmk1 coding upstream 1226478 75332453 ~ 75347896 (+)
LOC110524593 LOC106560306 coding downstream 33422 76609969 ~ 76639478 (+)
LOC110524594 NA coding downstream 71073 76647620 ~ 76656898 (+)
LOC110524592 LOC106560305 coding downstream 87317 76663864 ~ 76684035 (+)
LOC110524591 LOC106560304 coding downstream 116983 76693530 ~ 76704137 (+)
LOC118964533 NA coding downstream 140452 76716999 ~ 76721132 (+)
G440955 NA non-coding upstream 102321 76471833 ~ 76472053 (+)
G440951 NA non-coding upstream 104662 76469483 ~ 76469712 (+)
G440931 NA non-coding upstream 120986 76453109 ~ 76453388 (+)
G440930 NA non-coding upstream 121423 76452286 ~ 76452951 (+)
G440929 NA non-coding upstream 122142 76451855 ~ 76452232 (+)
G441106 NA non-coding downstream 114451 76690998 ~ 76691326 (+)
G441114 NA non-coding downstream 120672 76697219 ~ 76697420 (+)
G441115 NA non-coding downstream 120910 76697457 ~ 76697660 (+)
G441116 NA non-coding downstream 121787 76698334 ~ 76698605 (+)
G441110 NA non-coding downstream 127620 76704167 ~ 76704526 (+)
LOC110524571 LOC106560285 other upstream 1396087 75161317 ~ 75178287 (+)
G438719 NA other upstream 1797905 74772009 ~ 74776469 (+)
LOC110524560 LOC106560270 other upstream 1804208 74729349 ~ 74770168 (+)
G437327 NA other upstream 3079290 73456301 ~ 73495084 (+)
G436588 NA other upstream 3578639 72995499 ~ 72995735 (+)
G441903 NA other downstream 691665 77268212 ~ 77268766 (+)
G442273 NA other downstream 981783 77558330 ~ 77583227 (+)
LOC110524622 LOC106560333 other downstream 1669292 78245839 ~ 78288092 (+)
G445204 NA other downstream 3639931 80216478 ~ 80217090 (+)
G445211 NA other downstream 3658333 80234880 ~ 80235428 (+)

Expression


Co-expression Network