Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964535 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 79536584 ~ 79606825 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051592.1 | True | 1079 | mRNA | 0.42 | 3 | 79536584 | 79606825 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdh2 | LOC106560349 | coding | downstream | 77077 | 79385540 ~ 79459507 (-) |
| LOC118964780 | NA | coding | downstream | 242199 | 79294259 ~ 79294385 (-) |
| LOC118964722 | LOC106584191 | coding | downstream | 253993 | 79243247 ~ 79282591 (-) |
| LOC110524635 | LOC106560345 | coding | downstream | 309945 | 79219153 ~ 79237461 (-) |
| hyi | hyi | coding | downstream | 1149517 | 78383005 ~ 78387067 (-) |
| LOC110524638 | LOC106560389 | coding | upstream | 258352 | 79865177 ~ 79896739 (-) |
| b4galt6 | LOC106560385 | coding | upstream | 381301 | 79988126 ~ 80016243 (-) |
| LOC110524643 | LOC106560384 | coding | upstream | 468871 | 80075696 ~ 80166743 (-) |
| LOC118964650 | LOC106581256 | coding | upstream | 585560 | 80192385 ~ 80197919 (-) |
| LOC118964651 | LOC106581256 | coding | upstream | 601587 | 80208412 ~ 80210788 (-) |
| G444449 | NA | non-coding | downstream | 3846 | 79532506 ~ 79532738 (-) |
| G444443 | NA | non-coding | downstream | 11066 | 79524537 ~ 79525518 (-) |
| G444318 | NA | non-coding | downstream | 155127 | 79381242 ~ 79381457 (-) |
| G444238 | NA | non-coding | downstream | 182181 | 79354168 ~ 79354403 (-) |
| G444572 | NA | non-coding | upstream | 21609 | 79628434 ~ 79628680 (-) |
| G444573 | NA | non-coding | upstream | 23085 | 79629910 ~ 79630114 (-) |
| G444577 | NA | non-coding | upstream | 25613 | 79632438 ~ 79632646 (-) |
| G444581 | NA | non-coding | upstream | 33002 | 79639827 ~ 79640070 (-) |
| G444583 | NA | non-coding | upstream | 36486 | 79643311 ~ 79643544 (-) |
| G444001 | NA | other | downstream | 570555 | 78964631 ~ 78966029 (-) |
| G442807 | NA | other | downstream | 1454574 | 78081745 ~ 78082010 (-) |
| G442381 | rpl5 | other | downstream | 1909370 | 77623299 ~ 77627214 (-) |
| G442115 | NA | other | downstream | 2129449 | 77406742 ~ 77407135 (-) |
| G444691 | LOC106605670 | other | upstream | 124162 | 79730987 ~ 79731536 (-) |
| G445115 | NA | other | upstream | 375636 | 79982461 ~ 79987704 (-) |
| G445197 | NA | other | upstream | 569937 | 80176762 ~ 80177080 (-) |
| LOC118964653 | LOC106581256 | other | upstream | 618650 | 80223240 ~ 80233361 (-) |
| G445220 | NA | other | upstream | 639118 | 80245943 ~ 80261505 (-) |
