LOC118964724


Basic Information

Item Value
gene id LOC118964724
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80282518 ~ 80308754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979064.1
ATGGcccaggagaaggctgggggCCACCTGCTCACTCACGTCCCAGCCATCTCCTTTGAGACCGACTCTACTGTGGAGTGCACCTCCAAGAGGACTCCGGAAGAGAGGGAACGGgcAAAAAGTAAGAGGAGTGGCAAGAAGTCAAGGAAGCTGGACACTGACAATGATGCAGTCTCTAGGAATAAACACCTGGATAGAGGATCTGTAATTGAGCTCCTGGAGAAGAAAGCTGTTCAGGCTGCATTCGGCCCAGGCAACAAGGATGAGATGGAATACTCctacccaatcctcatctcattcctgcgcaatcttactgatgaGCAGTGGCAAGTGATCTACAAAGGACTAAAAAACCCTATGACGAAGGAACAGCTTGCCAAATTGTGCAAGACAATTGTAACCTTCATCGCACAGAGCACcctgcagatcctgctgccaGCCCTGGCCCGCGTACTTGGGGTAAAGGACTTTGCTGACGAcgacactgactcacccaagaggggtggcagtgcaagatcctttgctgcctttgatcaggaaagactggagctcatccaggaagttaGATATCTGGCGAAGAAAATGTATAAGGGCGGCACAGGGGCTCAACATCTCAGGTCCCTAACACCCTCTTCTAAGAGttcccagacctcagtgaaagtcctcctgggaatgacagaggacagaatcatcaaaagtgtccaggagcaactgtcTGATCATAATATCCTGTCCTCCTGCCCACCTGAGCTGACTGTTGGTCTTATCAAGGTGGTGGTCGAACAGCTTAACTCTGCCCTCTCTGCGACCATCAGCAGAGCCATTTCAGGGCGGTCCTCCCCTATTTCTTCTGGTACCCAGGCCGCTGAACAaatggtcaacatggtccagaaatgttttgatgatcACACCACCCCAGAGGACCAGAGCTCTACCTCTGTATTAGAGTCGTGCATTCCACCTGCAACAGAAGAAGTGAGGAGCTGA
>TU503822
ccttcaggtagcacagagggaggatggtgatcctcagagggaaggaaaggaagttGTTGAGGAAGAACCGGTGGCCACACCCAAAGAGGAGGCCAAGAAGGGAAGGAAGGTAAGATAGCAGTAGTGACAGAGCACATAATAGGCCTACTGGGTTACACTCTGTACCTGATAGCAGCCATACCATAGATATCTCAGATAACAACATACGtagtagctgttttcaaaacgtgttttaagagctgctttgacctggcccatagcctattcataaattgtctcagagtaggagtgcttatctaggatcagttttgcatttgagatcataatgaatacaatTATTTGGGCAAGGTTGAGCCCACACCTTATCTGATGAACTTTATGTATACGGGCCCTGGTGTTACATGTCTGCCATCATTTGAGATCTagaatctgttctgttctatcctaggcAAAAAGTAAGAGGAGTGGCAAGAAGTCAAGGAAGCTGGACACTGACAATGATGCAGGTCAGAGATTTACCTCTGTAGTACTACATTGTTTCTCTATTCTGTCTGTGATGTGCAGGTTGTGCTATCCATTTTCAAtgaaactgtagtctactgtaatcagTAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979064.1 False 987 mRNA 0.51 7 80282518 80308754
TU503822 True 615 lncRNA 0.43 1 80305087 80305701

Neighbor

gene id symbol gene type direction distance location
LOC110514042 LOC106581256 coding downstream 12217 80268607 ~ 80270301 (-)
LOC118964723 NA coding downstream 17958 80247693 ~ 80264560 (-)
LOC118964654 LOC106581256 coding downstream 22689 80256112 ~ 80259829 (-)
LOC118964655 LOC106581256 coding downstream 37870 80240999 ~ 80244648 (-)
LOC118964653 LOC106581256 coding downstream 49157 80223240 ~ 80233361 (-)
LOC118964725 NA coding upstream 5070 80313824 ~ 80380303 (-)
LOC118964659 LOC106581256 coding upstream 14708 80323462 ~ 80326940 (-)
LOC118964657 LOC106581256 coding upstream 30363 80339117 ~ 80340580 (-)
LOC118964658 LOC106581256 coding upstream 92277 80401031 ~ 80403359 (-)
LOC118964726 NA coding upstream 96049 80404803 ~ 80412432 (-)
G445217 NA non-coding downstream 39567 80242586 ~ 80242951 (-)
G445206 NA non-coding downstream 61625 80220638 ~ 80220893 (-)
G445202 NA non-coding downstream 81275 80200950 ~ 80201243 (-)
G445191 NA non-coding downstream 109897 80172237 ~ 80172621 (-)
G445189 NA non-coding downstream 110485 80171543 ~ 80172033 (-)
G445225 LOC106581256 non-coding upstream 2846 80311600 ~ 80311884 (-)
G445226 LOC106581256 non-coding upstream 3541 80312295 ~ 80312631 (-)
G445230 NA non-coding upstream 26996 80335750 ~ 80335953 (-)
G445244 NA non-coding upstream 78877 80387631 ~ 80388000 (-)
G445245 NA non-coding upstream 79893 80388647 ~ 80388868 (-)
G445220 NA other downstream 21013 80245943 ~ 80261505 (-)
G445197 NA other downstream 105438 80176762 ~ 80177080 (-)
G445115 NA other downstream 294814 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 550982 79730987 ~ 79731536 (-)
G446775 NA other upstream 1634531 81943285 ~ 81943611 (-)
G447220 NA other upstream 2081901 82390655 ~ 82391224 (-)
G447993 NA other upstream 3008759 83315161 ~ 83319715 (-)
G448079 NA other upstream 3201599 83510353 ~ 83520273 (-)
G448411 NA other upstream 3562848 83871602 ~ 83873308 (-)
LOC118936654 LOC106581256 coding downstream 3067 80288087 ~ 80302020 (-)
LOC118964656 LOC106581256 coding downstream 14909 80288573 ~ 80290178 (-)

Expression


Co-expression Network