LOC118964725


Basic Information

Item Value
gene id LOC118964725
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80313824 ~ 80380303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979065.1
AACCCACAAGAGAGACAATATTGCAAAGGCAGGACCATGTTCGATGGAAGGCGTAGGGGTAGGCAATCGAAAACGTTTGACGGGGAAATTTCTGTCAATATTAGCGAGTCCTACTGAGTGGGCAAGTAACCTTTCCCGCGCTCTTCCTAAAAATActatttgtgatgtcataaaggtcTAACGTTCCATGACGTCGCATGTAGCCCTAAATTACAGTCCCTGCTTGCAATATTGTCCTCACTCTCGACCTGAACTCAACTTGAATGTAACCAACACAGACAAGGACATGCTTTTTGAGATATAAAATAGCTTGAATGGATGAAGAAATGGTAAGCTAAATTACTTCATGCAATATTGGGGGAAAGTAAAAAAAGGGTAAAGCAATATAAGCAGATATTTCTTGTAAAAAGCTATAACATATTGTAAAGCAAATGTACCATTCTTTATAAAGTCACCAGCTTAGCGctgatatggctgtagctctatttatgatgtcctctgcacagatctactctgacattgacatattattacttattggaatgtctgtccttcaggtagcacagagggaggatggtgatcctcagagggaaggaaaggaagttGTTGAGGAAGAACCGGTGGCCACGCCCAAAGAGGAGGCCAAGAAGGGAAGGAAGgcAAAAAGTAAGAGGAGTGGCAAGAAGTCAAGGAAGCTGGACACTGACAATGATGCAGTCTCCAGGAATAAACACCTGGATAGAGGATCTGTAATTGAGCTCCTGGAGAAGAAAGCTGTTCAGGCTGCATTCGGCCCAGGCAACAAGGATGAGATGGAATACTCctacccaatcctcatctcattcctgcgcaatcttactgatgagcagtggcaagtgatctacaaaggactaaaaaaccctATGACGAAGGAACAGCTTGCCAAATTGTGCAAGACAATTGTAACCTTCATCGCACAGACCACCCTGAAGATCCTGCTGCCAGCCCTGGCCCGCGTACTTGGGGTAAAGGACTTTGCTGACGAcgacactgactcacccaagaggggtggcagtgcaagatcctttgctgcctttgatcaggaaagactggagctcatccaggaagttaGATATCTGGCGAAGAAAATGTATAAGGGCGGCACAGGGGCTCAACATCTCAGGTCCCTAACACCCTCTTCTAAGAGGTATGTTCCCCTCAAGGTTTTCATGTATGGATTTCAGCAAGATCATCTATCCCAGTGTTAG

Function

NR:

description
uncharacterized protein LOC110526909

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979065.1 True 1247 mRNA 0.45 5 80313824 80380303

Neighbor

gene id symbol gene type direction distance location
LOC118964724 NA coding downstream 5070 80282518 ~ 80308754 (-)
LOC118936654 LOC106581256 coding downstream 11804 80288087 ~ 80302020 (-)
LOC118964656 LOC106581256 coding downstream 23646 80288573 ~ 80290178 (-)
LOC110514042 LOC106581256 coding downstream 43523 80268607 ~ 80270301 (-)
LOC118964723 NA coding downstream 49264 80247693 ~ 80264560 (-)
LOC118964658 LOC106581256 coding upstream 20728 80401031 ~ 80403359 (-)
LOC118964726 NA coding upstream 24500 80404803 ~ 80412432 (-)
LOC118964727 LOC106581256 coding upstream 34640 80414943 ~ 80418042 (-)
LOC118964666 NA coding upstream 40784 80421087 ~ 80438415 (-)
LOC118964663 LOC106581256 coding upstream 50849 80431152 ~ 80434587 (-)
G445226 LOC106581256 non-coding downstream 1193 80312295 ~ 80312631 (-)
G445225 LOC106581256 non-coding downstream 1940 80311600 ~ 80311884 (-)
G445217 NA non-coding downstream 70873 80242586 ~ 80242951 (-)
G445206 NA non-coding downstream 92931 80220638 ~ 80220893 (-)
G445244 NA non-coding upstream 7328 80387631 ~ 80388000 (-)
G445245 NA non-coding upstream 8344 80388647 ~ 80388868 (-)
G445247 NA non-coding upstream 13169 80393472 ~ 80393693 (-)
G445248 NA non-coding upstream 14623 80394926 ~ 80395331 (-)
G445265 NA non-coding upstream 45723 80426026 ~ 80426401 (-)
G445220 NA other downstream 52319 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 87623 80223240 ~ 80233361 (-)
G445197 NA other downstream 136744 80176762 ~ 80177080 (-)
G445115 NA other downstream 326120 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 582288 79730987 ~ 79731536 (-)
G446775 NA other upstream 1562982 81943285 ~ 81943611 (-)
G447220 NA other upstream 2010352 82390655 ~ 82391224 (-)
G447993 NA other upstream 2937210 83315161 ~ 83319715 (-)
G448079 NA other upstream 3130050 83510353 ~ 83520273 (-)
G448411 NA other upstream 3491299 83871602 ~ 83873308 (-)

Expression


Co-expression Network