LOC118964657 (LOC106581256)


Basic Information

Item Value
gene id LOC118964657
gene name LOC106581256
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80339117 ~ 80340580 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036978511.1
gcacaaagcagagggtcatctccaaccggaactgtaactgatataggcagtctactgagtggtaagtcctaccctctgccatctttctccgccatcagcatgacaacaagtgggacctccaatgctgcacgAGGCTTTGAGGCCAACATAGATGCTGAGGAAAGGGATACCATCAGTTGTTTCGATGTACCTCAGAGCATTGTTTGTGATCAGAATTCAACCAGCCCGGATGTTGCCTCGCTTTCAACCCCATCCACTGTTAACTTAGTCGGTGATGATGACTTCACcggcctcatcagcatgttagtggtgagacttctgtcaaaaatccaaacccaaactgatctgtacccaactgacgtcacacgcacgtcacaagacctgattccaaaagttatagctgccttctgtgcatggtcaggctgctctgagacccaagcttatcccaagaacctgaagagtcacaaagtatacagcaccgtctacaaacatctgttgaaggagtttggctcagagaaaatactccaactggccgtgtcgactcaggactcCACTTTCAATAGGATTCTTGTGAAGTCATTGAGCAAGGAGCTTCTCCACAGTTGTAACGAGGCATCAAGAGCAGCCTCAAGAACATCTTTCGAAGCCACCAGGCCAGAAGCTCTTCTCATGGCTGAAGATGTGAAGGCTACCAGAGGGAAGCTGTCTTTCCTACAAAGGCTTGCCAGACTGAAATTCAACTTAAAGccattcatgatgggaaacaagaagaattcccgccattctgaatccaaagaccagactactgctgaagagatcatgtTGGCACATCCTGCCACGTTTGGACTCCCAGAgggtcttccctccacctctcaacaggagaagcctcgcaaacgtccccttctaatcaggatgttttccaccatctccataggcctatccaagccattcaaacggttttcaaagcaagcttaatacaacaatttcctttaatacagtaatatttgcattg

Function

NR:

description
uncharacterized protein LOC110514042

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036978511.1 True 1012 mRNA 0.47 3 80339117 80340580

Neighbor

gene id symbol gene type direction distance location
LOC118964659 LOC106581256 coding downstream 12177 80323462 ~ 80326940 (-)
LOC118964724 NA coding downstream 30363 80282518 ~ 80308754 (-)
LOC118936654 LOC106581256 coding downstream 37097 80288087 ~ 80302020 (-)
LOC118964656 LOC106581256 coding downstream 48939 80288573 ~ 80290178 (-)
LOC110514042 LOC106581256 coding downstream 68816 80268607 ~ 80270301 (-)
LOC118964658 LOC106581256 coding upstream 60451 80401031 ~ 80403359 (-)
LOC118964726 NA coding upstream 64223 80404803 ~ 80412432 (-)
LOC118964727 LOC106581256 coding upstream 74363 80414943 ~ 80418042 (-)
LOC118964666 NA coding upstream 80507 80421087 ~ 80438415 (-)
LOC118964663 LOC106581256 coding upstream 90572 80431152 ~ 80434587 (-)
G445230 NA non-coding downstream 3164 80335750 ~ 80335953 (-)
G445226 LOC106581256 non-coding downstream 26486 80312295 ~ 80312631 (-)
G445225 LOC106581256 non-coding downstream 27233 80311600 ~ 80311884 (-)
G445217 NA non-coding downstream 96166 80242586 ~ 80242951 (-)
G445244 NA non-coding upstream 47051 80387631 ~ 80388000 (-)
G445245 NA non-coding upstream 48067 80388647 ~ 80388868 (-)
G445247 NA non-coding upstream 52892 80393472 ~ 80393693 (-)
G445248 NA non-coding upstream 54346 80394926 ~ 80395331 (-)
G445265 NA non-coding upstream 85446 80426026 ~ 80426401 (-)
G445220 NA other downstream 77612 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 112916 80223240 ~ 80233361 (-)
G445197 NA other downstream 162037 80176762 ~ 80177080 (-)
G445115 NA other downstream 351413 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 607581 79730987 ~ 79731536 (-)
G446775 NA other upstream 1602705 81943285 ~ 81943611 (-)
G447220 NA other upstream 2050075 82390655 ~ 82391224 (-)
G447993 NA other upstream 2976933 83315161 ~ 83319715 (-)
G448079 NA other upstream 3169773 83510353 ~ 83520273 (-)
G448411 NA other upstream 3531022 83871602 ~ 83873308 (-)

Expression


Co-expression Network