LOC118964658 (LOC106581256)


Basic Information

Item Value
gene id LOC118964658
gene name LOC106581256
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80401031 ~ 80403359 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036978512.1
ccctcagccatattctggttttaattcagaaagagctgtcaaaatctgaccaaaCGGTGACTGCGCTTTCACAAATAGAGAATGTGGTTGGAATGATGCTGAAGGATGTTGAAAGGGTAAGCAGTAAATGTGGTGAGGAACTGATCTATCAAGCGCCACAGCGTtcttcctcctcgttgtcatCCTCATCTGCCAGATCAAAGAAGTCAGAGTGTGAATTTtcactccctggcactcccatctcTTCTGATTTACCAGAGAGTATTACTCAGCCCATTGTGAGATGCTCAGTCATCGACATGGGCAAATCTACTAAGCCAAAAACATTGGTGTGTGATGCCAGGGAAAGCATGTCTGCAATAGTGGATACCATCATAAAGGAGGTACatccagaggaagaaggggaggttgcattccaccctgatctaacagctgcaatagcaagactggaggagctcatatctcagggtaggattggtgctctctcacgtgatcttactcaccaagtcaaccgcatcatttctgagagcaacttgacccctctggttctgacagtggcggctggaaagagtgcatccgatacagtccttactgagctgaagaggaatgacaagacggtggggaagcccacagcttacaagctggttcagctttttgcagaggagtctgtgaagcgcctcttgcttcctagccttgtgccctctacagcttcaatgagtttggctcagggaGTTAGTGTGCCGGCTAGCGTATCTGAAGATAGGATTTCATGTTCTTTTTCTACATCAGCATTTAGTGACACAGTCAGCCTGTTTACCAAAGTAATGGTAAGTCAGGTCATGGACTCTGTGGTTTCTGATGCACAAAGCAGAGGGTCATCTCCAACCGGAACTGTAACTGATATAGGCAGTCTACTGAGTGGTAAGTCCTACCCTCTGCCATCTttctctgccatcagcatgacaacaagtgggacctccaatgctgcacAAGGCTTTGAGGCCAACATAGATGCTGAGGAAAGTGATATCATCAGTTGTTTCGGTGTACCTCAGAGCATTGTTTGTGATCAGAATTCAACCAGCCCGGATGTTGCCTCGCTTTCAACCCCATCCACTGACAACTTAGTCGGTGATGATGACTTCACcggcctcatcagcatgttagtGGTGAGACTTCTGTCAAAAATACAAACCCAAACTGATCTGTACCCAACTGACGTCACACGCACGTCACAAGACCTGATTCCAAAAGTTATAGCTGCcttctgtgcatggtcaggctgctctgagacccaagcttatcccaagaacctgaagagtcacaaagtatacagcaccgtctacaaacatctgttgaaggagtttggctcagagaaaatactccaactggccgtgtcgactcaggactcCACTTTCAATAGGATTCTTGTGAAGTCATTGAGCAAGGAGCTTCTCCACAGTTGTAACGAGGCATCAAGAGCAGCCTCAAGAACATCTTTCGAAGCCACCAGGCCAGAAGCTCTTCTCATGGCTGAAGATGTGAAGGCTACCAGAGGGAAGCTGTCTTTCCTACAAAGGCTTGCCAGACTGAAATTCAACTTAAAGCCATTCATGATGGGAAACAAGAAGGATTCCAATAAGAAATCCCGCCATTCTGAATCCAAAGACCAGACTACTGCTGAAGATATCATGTTGGCACATCCTGCCACGTTTGGACTCCCAGAgggtcttccctccacctctcaacaGGAGAAGCCTCGCAAACGTCCCCTTCTAATCAGGATGTTTTCCACCATCTCCATAGGCCTATCCAAGCCATTCAAACGGTTTTCAAAGCAAGCTTAATACAACATTTTCCTTTAATACAGTAATATT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581256

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036978512.1 True 1877 mRNA 0.47 3 80401031 80403359

Neighbor

gene id symbol gene type direction distance location
LOC118964725 NA coding downstream 20728 80313824 ~ 80380303 (-)
LOC118964657 LOC106581256 coding downstream 60451 80339117 ~ 80340580 (-)
LOC118964659 LOC106581256 coding downstream 74091 80323462 ~ 80326940 (-)
LOC118964724 NA coding downstream 92277 80282518 ~ 80308754 (-)
LOC118936654 LOC106581256 coding downstream 99011 80288087 ~ 80302020 (-)
LOC118964726 NA coding upstream 1444 80404803 ~ 80412432 (-)
LOC118964727 LOC106581256 coding upstream 11584 80414943 ~ 80418042 (-)
LOC118964666 NA coding upstream 17728 80421087 ~ 80438415 (-)
LOC118964663 LOC106581256 coding upstream 27793 80431152 ~ 80434587 (-)
LOC118964660 LOC106581256 coding upstream 52013 80455372 ~ 80462768 (-)
G445248 NA non-coding downstream 5700 80394926 ~ 80395331 (-)
G445247 NA non-coding downstream 7338 80393472 ~ 80393693 (-)
G445245 NA non-coding downstream 12163 80388647 ~ 80388868 (-)
G445244 NA non-coding downstream 13031 80387631 ~ 80388000 (-)
G445230 NA non-coding downstream 65078 80335750 ~ 80335953 (-)
G445265 NA non-coding upstream 22667 80426026 ~ 80426401 (-)
G445267 NA non-coding upstream 26785 80430144 ~ 80430372 (-)
G445518 NA non-coding upstream 254234 80657593 ~ 80661257 (-)
G445557 NA non-coding upstream 322412 80725771 ~ 80791140 (-)
G445220 NA other downstream 139526 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 174830 80223240 ~ 80233361 (-)
G445197 NA other downstream 223951 80176762 ~ 80177080 (-)
G445115 NA other downstream 413327 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 669495 79730987 ~ 79731536 (-)
G446775 NA other upstream 1539926 81943285 ~ 81943611 (-)
G447220 NA other upstream 1987296 82390655 ~ 82391224 (-)
G447993 NA other upstream 2914154 83315161 ~ 83319715 (-)
G448079 NA other upstream 3106994 83510353 ~ 83520273 (-)
G448411 NA other upstream 3468243 83871602 ~ 83873308 (-)

Expression


Co-expression Network