LOC118964727 (LOC106581256)


Basic Information

Item Value
gene id LOC118964727
gene name LOC106581256
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80414943 ~ 80418042 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979067.1
cctctgccatctttctccgccatcagcatgacaacaagtgggacctccaatgctgcacgAGGCTTTGAGGACAACATAGATGCTGAGGAAAGTTGTTTCGGTGTACCTCAGAGCATTGTTTGTGATCAGAATTCAACCAGCCCGGATGTTGCCTCGCTTTCAACCCCATCCACTGACAACTTAGTCGGTGATGATGACTTCACcggcctcatcagcatgttagtggtgagacttctgtcaaaaatccaaacccaaactgatctgtacccaactgacgtcacacgcacgtcacaagacctgattccaaaagttatagctgccttctgtgcatggtcaggctgctctgagacccaagcttatcccaagaacctgaagagtcacaaagtatacagcaccgtctacaaacatctgttgaaggagtttggctcagagaaaatactccaactggccgtgtcgactcaggactcCACTTTCAATAGGATTCTTGTGAAGTCATTGAGCAAGGAGCTTCTCCACAGTTGTAACGAGGCATCAAGAGCAGCCTCAAGAACATCTTTCGAAGCCACCAGGCCAGAAGCTCTTCTCATGGCTGAAGATGTGAAGGCTACCAGAGGGAAGCTGTCTTTCCTACAAAGGCTTGCCAGACTGAAATTCAACTTAAAGccattcatgatgggaaacaagaagaattcccgccattctgaatccaaagaccagactactgctgaagagatcatgtTGGCACATCCTGCCACATTTGGACTCCCAGAgggtcttccctccacctctcaacaggagaagcctcgcaaacgtccccttctaatcaggatgttttccaccatctccataggcctatccaagccattcaaacgCTTTTACCTTCGACATCAACAAGCGACGCACGGGCTGGTCCTGCAGACTCCCACGCCCATGGcccaggagaaggctgggggCCACCTGCTCACTCACGTCCCAGCCATCTCCTTTGAGACCGACTCTACTGTGGAGTGCACCTCCAAGAGGACTCCGGAAGAGAGGGACCGGGTGACGGTTAAACTGGCCAACATGGCCTTGATGGGAAGGATCAAAAGTCTTGGCTGTGAAATGCCCATTATATGTTAA

Function

NR:

description
uncharacterized protein LOC110507890

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979067.1 True 1122 mRNA 0.50 5 80414943 80418042

Neighbor

gene id symbol gene type direction distance location
LOC118964726 NA coding downstream 2511 80404803 ~ 80412432 (-)
LOC118964658 LOC106581256 coding downstream 11584 80401031 ~ 80403359 (-)
LOC118964725 NA coding downstream 34640 80313824 ~ 80380303 (-)
LOC118964657 LOC106581256 coding downstream 74363 80339117 ~ 80340580 (-)
LOC118964659 LOC106581256 coding downstream 88003 80323462 ~ 80326940 (-)
LOC118964666 NA coding upstream 3045 80421087 ~ 80438415 (-)
LOC118964663 LOC106581256 coding upstream 13110 80431152 ~ 80434587 (-)
LOC118964660 LOC106581256 coding upstream 37330 80455372 ~ 80462768 (-)
LOC118964664 LOC106581256 coding upstream 51464 80469506 ~ 80472720 (-)
LOC118964668 LOC106581256 coding upstream 55998 80474040 ~ 80477042 (-)
G445248 NA non-coding downstream 19612 80394926 ~ 80395331 (-)
G445247 NA non-coding downstream 21250 80393472 ~ 80393693 (-)
G445245 NA non-coding downstream 26075 80388647 ~ 80388868 (-)
G445244 NA non-coding downstream 26943 80387631 ~ 80388000 (-)
G445230 NA non-coding downstream 78990 80335750 ~ 80335953 (-)
G445265 NA non-coding upstream 7984 80426026 ~ 80426401 (-)
G445267 NA non-coding upstream 12102 80430144 ~ 80430372 (-)
G445518 NA non-coding upstream 239551 80657593 ~ 80661257 (-)
G445557 NA non-coding upstream 307729 80725771 ~ 80791140 (-)
G445220 NA other downstream 153438 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 188742 80223240 ~ 80233361 (-)
G445197 NA other downstream 237863 80176762 ~ 80177080 (-)
G445115 NA other downstream 427239 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 683407 79730987 ~ 79731536 (-)
G446775 NA other upstream 1525243 81943285 ~ 81943611 (-)
G447220 NA other upstream 1972613 82390655 ~ 82391224 (-)
G447993 NA other upstream 2899471 83315161 ~ 83319715 (-)
G448079 NA other upstream 3092311 83510353 ~ 83520273 (-)
G448411 NA other upstream 3453560 83871602 ~ 83873308 (-)

Expression


Co-expression Network