LOC118964664 (LOC106581256)


Basic Information

Item Value
gene id LOC118964664
gene name LOC106581256
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 80469506 ~ 80472720 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036978523.1
ccaaccggaactgtaactgatataggcagtctactgagtggtaagtcctaccctctgccatctttctccgccatcagcatgacaacaagtgggacctccaatgctgcacgAGGCTTTGAGGCCAACATAGATGCTGAGGAAAGTTGTTTCGGTGTACCTCAGAGCATTGTTTGTGATCAGAATTCAACCAGCCCGGATGTTGCCTCGCTTTCAACCCCATCCACTGACAACTTAGTCGGTGATGATGACTTCACcggcctcatcagcatgttagtggtgagacttctgtcaaaaatccaaacccaaactgatctgtacccaactgacgtcacacgcacgtcacaagacctgattccaaaagttatagctgccttctgtgcatggtcaggctgctctgagacccaagcttatcccaagaacctgaagagtcacaaagtatacagcaccgtctacaaacatctgttgaaggagtttggctcagagaaaatactccaactggccgtgtcgactcaggactcCACTTTCAATAGGATTCTTGTGAAGTCATTGAGCAAGGAGCTTCTCCACAGTTGTAACGAGGCATCAAGAGCAGCCTCAAGAACATCTTTCGAAGCCACCAGGCCAGAAGCTCTTCTCATGGCTGAAGATGTGAAGGCTACCAGAGGGAAGCTGTCTTTCCTACAAAGGCTTGCCAGACTGAAATTCAACTTAAAGccattcatgatgggaaacaagaagaattcccgccattctgaatccaaagaccagactactgctgaagagatcatgtTGGCACATCCTGCCACGTTTGGACTCCCAGAgggtcttccctccacctctcaacaggagaagcctcgcaaacgtccccttctaatcaggatgttttccaccatctccataggcctatccaagccattcaaacgCTTTTACCTTCGACATCAACAAGCGACGCACGGGCTGGTCCTGCAGACTCCCACGCCCATGGcccaggagaaggctgggggCCACCTGCTCACTCACGTCCCAGCCATCTCCTTTGAGACCGACTCTACTGTGGAGTGCACCTCCAAGAGGACTCCGGAAGAGAGGGACCGGGTGAAGGTTAAACTGGCCAACATGGCCTTGATGGGAAGGATCAAAAGTCTTGGCTGTGAAATGCCCATTATGTGTGATTATCGAATTGATCATTTTCCACTTTTGAAACAACAATGGGAAAGACAGGGTTTATAGCAAAGGTTGGTCAGATTGGGCTTTTGGAAAAATTGGGAGAATGAAAGTGCACTCCTGATTCAGAGAGAAAGATCCAGCTTAATCATCCATACCATTgtttaaattacaataaaaaaacattcaaactgttcctgagtttcgaaagacagagaaaggaaaacatCATTATCTTCAGTCTGTTCACACCTGTTCACACAAGTCCTACTGTCCACAATCTCAGGGTTCTTCAATACAAACACACCTGTTTCAGAAAACCTGATCACTTTCACATTCGAACAATGTTTGTAGGATACTTTTCAATAACTCAATAAATGTAAGTGTTGAAACCATACATAGCTGGTAACTTGAGCTCGGCAGAGTAGTTTTGACCTGTGTCCAGATGCAGTCATTTATGTTGTCTAAAGGCAATTTGTCTCTTAtaacaatgttatttttctgaATAATCTAATTTAATTGACTTGTAGGTAGTCACTAACTATTTGTAGCATGTGTTCCTCTGTTTATTGATATTtacatggtgtgtatgtgttaagATGTTAAGTAATTAATGTTGATATTATCCAAAGGGTTTTTAACTGAAATGT

Function

NR:

description
uncharacterized protein LOC110507890

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036978523.1 True 1814 mRNA 0.45 4 80469506 80472720

Neighbor

gene id symbol gene type direction distance location
LOC118964660 LOC106581256 coding downstream 6738 80455372 ~ 80462768 (-)
LOC118964666 NA coding downstream 31091 80421087 ~ 80438415 (-)
LOC118964663 LOC106581256 coding downstream 34919 80431152 ~ 80434587 (-)
LOC118964727 LOC106581256 coding downstream 51464 80414943 ~ 80418042 (-)
LOC118964726 NA coding downstream 57074 80404803 ~ 80412432 (-)
LOC118964668 LOC106581256 coding upstream 1320 80474040 ~ 80477042 (-)
LOC118964665 LOC106581256 coding upstream 11137 80483857 ~ 80485280 (-)
LOC118964667 NA coding upstream 15564 80488284 ~ 80490780 (-)
LOC118964662 LOC106581256 coding upstream 26988 80499708 ~ 80502221 (-)
LOC110524644 NA coding upstream 31575 80504295 ~ 80505988 (-)
G445267 NA non-coding downstream 39134 80430144 ~ 80430372 (-)
G445265 NA non-coding downstream 43105 80426026 ~ 80426401 (-)
G445248 NA non-coding downstream 74175 80394926 ~ 80395331 (-)
G445247 NA non-coding downstream 75813 80393472 ~ 80393693 (-)
G445518 NA non-coding upstream 184873 80657593 ~ 80661257 (-)
G445557 NA non-coding upstream 253051 80725771 ~ 80791140 (-)
G445596 NA non-coding upstream 331593 80804313 ~ 80806686 (-)
G445610 NA non-coding upstream 354449 80827169 ~ 80827490 (-)
G445613 NA non-coding upstream 361681 80834401 ~ 80834710 (-)
G445220 NA other downstream 208001 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 243305 80223240 ~ 80233361 (-)
G445197 NA other downstream 292426 80176762 ~ 80177080 (-)
G445115 NA other downstream 481802 79982461 ~ 79987704 (-)
G444691 LOC106605670 other downstream 737970 79730987 ~ 79731536 (-)
G446775 NA other upstream 1470565 81943285 ~ 81943611 (-)
G447220 NA other upstream 1917935 82390655 ~ 82391224 (-)
G447993 NA other upstream 2844793 83315161 ~ 83319715 (-)
G448079 NA other upstream 3037633 83510353 ~ 83520273 (-)
G448411 NA other upstream 3398882 83871602 ~ 83873308 (-)

Expression


Co-expression Network