LOC118936420 (LOC106560395)


Basic Information

Item Value
gene id LOC118936420
gene name LOC106560395
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 82141784 ~ 82149709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036978551.1
gtgacaggttcTCCGTCGTTGTGTCTGCTGATTGATCAATATCCGTTCTAATGATGTCTGTTCCACTCCCAGGACCCTCCCACTCCCCCCTCTCAGGAAGAGGAAGTGATTAAATCAAACATCCTGTAGACTTCCCAACCAGGACACGTATATTCCCGTCACTGACTTTTTTGTAAACAGTGGAACCAGGAAGTGACCTTGGGATAGTTGTTACAGGGGTGGTGGAACAGGTTCTAGAGCAAGGATAGAGAAAGGATAGTTTTTACATAGGGTTAACAGTACAGGTCCTGCAGTGGTCTGTCATATTGGTACAGTGTGTTGATGGCCATAGGGATACCGGGAACAGCGGTCACCCTTAAACCCTGGAATGTTGTAGAATGGTTACATCTCTCGATCCCATGTATCCCTATGTCCATCAATGCACTGTACCAATGTGCCAGGGCTCTGTAGGACCTGTTCTGCCACCCCTGTAACAACTGTCCCAGGACCAGTGTAATAGCCCTATCTAGCTCTGGTTGCCTGTCTACCTCTATTCTAGGACATGTACTGTTAACCCTCTGTAACAACTGTCTCAGGACCTGCTCATATCTGTGTATTAGCCCTATCTGACTTTTAGTTCCTCGTATCTGTTCTATGACATGTACTGCTAACCGTCTATAACTGTCTGAAGACCTGTTAATACCTGTGCAATAGCCCTATGTAAGTCTTGTTTCGTGTCTACCTATCTGCCTCCCTGTTTTAGAAACTGTACTGTTATAACCATGTAACAACTGTCCCAGGACCTGTGTATATAACAAGCCTGATCTGATCTAGGATTGGTACTGTTAACTCTGCAATAACTGTTCTTTCAGGGTGATGAACCATCTAAAGTCAAGTTGTAAAATCCTGAAATTTTCCTTTAACCCTTTGTAAAAACTGTTTCAGGACCTGTTAATACCTGTGTAGTAGTCCTATCTAACTGCTAGGTTCCCTGTCTGAATCTGTGTTAGGACCTGTACTACCAGTCGTATAGTCAGGTAGGAGTGCTGTTTGCCTCCATCGCTAATTTCAATGACTTCTACATTGAGCTGGATGGCAACAACATGGGAGTAGAGTGTCTCAGGCTGCTCAACGAGATCATCGCAGACTTTGACGAGctGATGGACAAAGAGTGCTATAAGGACATTGAGAAGATCAAAACTATCGGCAGCACATACATGGCTGCAGTAGGCCTGGTACCTACCACTGGCTCCAAGGCTAAGAAGTCCACCTCCTCACACTTATGTACAGTGGCAGATTTTGCTGTTGAGATGTATGATGTACTGGATGCCATCAACTACCAGTCGTATAACGACTTTGTCTTGAGAGTGGgtattaACGTGGGTCCAGTAGTAGCAGGAGTGATTGGAGCACGGAGGCCTCAGTATGATATCTGGGGTAACACAGTCAACGTGGCCAGCAGGATGGACACCACCGGACTACCTGGCAAGATACAGGTGACAGAAGATGTGCAGCGCATCATTAAGGGTCAATATGACTTTGTGTGCCGTGGCAAGGTCAGCGTCAAGGGCAAAGGACAGATGCTTACCTACTTCCTGGAGGGGCGGATCCCCGGCAGAGGGTCACAGCACCAGCCCAGGAACCTGGATCGCTCCCGGACAAGTCTTTTCAACCGTTCAGCCATTAGCAACATCTGCACCAAACTGAGCCCCGCCCCCACCATGACCGCCTATTCCACGATGCGAAACCCCACCCCCGGCACAGCCAATGCAGCAACCACCTCCACAAACAGCACCATCCTCTACCTGCCCTCTGTGGCTGTTCCCACGGCGATGGAGGTGTGAGTGAGTGGCTGACATGAAGACTGTCTAAATAGTGACCAAGGAATCTCCCTTGACAGATAGAGAGTGGAGATCAAGAGAGAGCTAGAGTAGAGCTGTTAGAAAGTCACTGAAAGTAAGAGTGAaatagggatgagagagagagaggaagaagttgCGGGTTCCACTTTAATGGACtatcactagagaatgtggttccaccttactggactgtcactagagaatgtggttccattttactgga

Function

NR:

description
PREDICTED: adenylate cyclase type 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036978551.1 True 2064 mRNA 0.48 5 82141784 82149709
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118964728 LOC106560395 coding upstream 284 82139830 ~ 82141500 (+)
LOC110523017 LOC105011947 coding upstream 11273 81932984 ~ 82130511 (+)
LOC110523016 LOC106560408 coding upstream 221278 81892826 ~ 81920506 (+)
LOC110524668 LOC106560365 coding upstream 316088 81781102 ~ 81825696 (+)
bphl bphl coding upstream 507605 81625006 ~ 81634179 (+)
igfbp1a LOC101268901 coding downstream 68763 82218472 ~ 82220496 (+)
LOC110523018 LOC106560398 coding downstream 391828 82541537 ~ 82600595 (+)
c5h8orf82 cssa10h8orf82 coding downstream 456447 82606156 ~ 82629774 (+)
naprt naprt coding downstream 482824 82632533 ~ 82660203 (+)
LOC110523019 LOC106560399 coding downstream 517486 82667195 ~ 82739466 (+)
G446473 NA non-coding upstream 54513 82087051 ~ 82087271 (+)
G446471 NA non-coding upstream 56734 82084482 ~ 82085050 (+)
G446470 NA non-coding upstream 57887 82083647 ~ 82083897 (+)
G446469 NA non-coding upstream 61435 82080075 ~ 82080349 (+)
G446468 NA non-coding upstream 63724 82077590 ~ 82078060 (+)
G446513 NA non-coding downstream 7103 82156812 ~ 82158416 (+)
G446514 NA non-coding downstream 8988 82158697 ~ 82160896 (+)
G446515 NA non-coding downstream 14195 82163904 ~ 82165461 (+)
G446535 NA non-coding downstream 40566 82190275 ~ 82190584 (+)
G446549 NA non-coding downstream 61953 82211662 ~ 82211876 (+)
G446381 NA other upstream 244003 81895804 ~ 81897781 (+)
G445211 NA other upstream 1906356 80234880 ~ 80235428 (+)
G445204 NA other upstream 1924694 80216478 ~ 80217090 (+)
LOC110524622 LOC106560333 other upstream 3883328 78245839 ~ 78288092 (+)
G442273 NA other upstream 4558557 77558330 ~ 77583227 (+)
G447001 NA other downstream 274489 82424198 ~ 82442223 (+)
G447020 NA other downstream 302897 82452606 ~ 82458383 (+)
LOC110524684 NA other downstream 1639309 83788574 ~ 83794357 (+)
G448698 NA other downstream 2152391 84302100 ~ 84302473 (+)
LOC118964674 NA other downstream 2238384 84386803 ~ 84389601 (+)

Expression

LOC118936420(LOC106560395) Expression in all Baseline Samples

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LOC118936420(LOC106560395) Expression in each Bioproject

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LOC118936420(LOC106560395) Expression in each Sample
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Co-expression Network