igfbp3 (igfbp-3a1)


Basic Information

Item Value
gene id igfbp3
gene name igfbp-3a1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 82275087 ~ 82346684 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604522.2
TTGTTGGCTCTTTTTCCCGCCTGTATAAAACGACAAGTTCGCTTAAAAGAAAATACAGATGGAGAAGTCTAGCCGGTTCGCTGTGACACAGAGAGTCCCCTTAAGCTTACGTGACAACTCGCATACTGTCCCTTTGTGACCAGCTTATCGGCAGAATGCCCGGTCTATGCGTGCTTTGTCTCACTGCGGTGCTCGCTGCATTCACCCGGTTCGCGGAGACCGTTGGACCGGTGGTCCGATGCGAGCCGTGTGACGCCGGGGCTCTTATGGAGTGCAAGCCGCTGTCAAAAGACTGCGCAGAGAGGGTGCGGGAGCCCGGCTGTGGGTGCTGTCTGTCGTGCGCCCTTGCTGAGGGTCAGGCGTGTGGAGTGTACACCGGGCGCTGTGGCTCCGGGCTGATTTGTCAGTTCCAACCCGGGGAGACCCGACCACTGCAAGCCTTGCTAGAGGGACGGGGAGCGTGCTCCAGAGCCGCGTCCAAAAAACTCAACACCTTTCTGCTCCCCGCGCAGAAACAAGAGAACACAAGCGGGGAGCATTCCGGGGCAGGGGATGAACGGCGTGCCAACGGCACCGTGACGACGACCAAGATGGTGGCAGGGGGCGCGGTAGGTGTGGAAGGCGGAGGTGGTGGACATCGGGGGGCGATAGAGGCCAAACCGCCGCTGCACACCAAGCTAGACGTGATCAAGAAGGAGCAGAATAAGAAGAGCCAGAGCTACAAGGTGGAGTCAGTGTCTGGGGGAGTCAACTCCGACATGCACAACTTCTCCCTGGATAACAAGAGGGAGACCGAGTATggcccatgcaggagagagatggaaagcaTCCTGAACAGTCTTAAAATCTCCAATGTGCTCAACCCCAGAGGCTTCCGTATCCCCAACTGTGACAAAAAGGGCTTCTACAAGAAAAAACAAtgccgTCCTTccaaagggaggaagaggggttACTGCTGGTGTGTGGATAAGTACGGTCAGCCTCTCCCTGGCTAtgatggaaaggagagaggagaatccCAGTGCAACAACCTGGAGAACaaatgagaggcagagagaggatggagtgatggaggcaaggcaagaagaagagaggaatgggagagagagatacttttTTTAACTCCTGCCTTGCACGTAACCGTCGAAAGAGTGCCGGACCGTTGACCTCAGGTCACATGACTGCTGggtgggggaggggaagagaggggaagggaggggaagggagaggcagACTGGGACAGCACAGCCTAATAGGCCAAGCCTTCTGTCCATCATCTGCAGCTATCTGCTCTGTGCTATGGGAACCTCTAGCTACCCCTCGTAtgaaaacaacagagagagaaactaaaCATCTGCACTATTattttagagagagaggatggagggacttTTCcactcactttaaagaggacttgTCTGTGACTGTGACCCAACGCAACATgcttgtgtatgtttgtgtgtgtgtatgcatgcatgtgtgagcatgtatgagtgtttgtgtgtgtgtgtatgtgtgtgtaaatgcTGTCTTTCAATAAGCTCAGTTTAGAGGTGGAAGAAAACCTCTTGACATCCAAACCCTGCCCCCTTCTATCCTGTCATGCAGAGACTCCTCCCCTTTCTCAGGATCCATCATTATGAAGTGAAGGCTTATGGGTAGGCCagcctctgacctcttccctgcCATGTTGGACACCACTGGCCTTCCCCACTGTCTCCATAGCAACCAGCTTGTCCCGCCCGATGTGCTGCGTCACATTTACAGGTTTAGGGGGAAGGAAAGGAATGGAGACGATGCCTTAAACCCACActgcccctctccccctcttccccatcCCTGACCCCTACCCCTCCCTTTCTCATATTCCTTGGTTAGCCCTCTGCGGTCCTCataggaccccaggaagagtagctgctgcttttgcaaaagTTCATGGGGATTCAAAAAAAATAATCAACAGGTTCTCacataacgttactaccctgcagcCCTGATCTGGTTAGCTAGCTGGCGGGTTAGGTTAGCATAGTTAGCCAAACCATCACTTCTTCATTCAGGAAATAGGGCCAGTGGTGTTGTCATGAcaacatggtccctctatctgCAGTACTCTTCCTGTCTATGGTGCATATGTCCTGGTGTGGGGTCCTTTAGACTGGGCATGCTCGGTGGGACCGGGCTGCTCTCTATGCCATAGGAGCCAGCTTCGAGGCCAAGCACAACCACTTAAAGCACTTTAGCTGCACCCAACCAACTTCCCTACAGCGCTCCTCACAGTTAAAGACCATCTCTACCCATTGTAGTGTAGTAGTCATAGCTTTTAATTGTTGCAACATTTAACAAGGTTTATAGCACTGTATAacaaaacatcaacaacaacaaaataaaaaacaatgttaCACAAGCACTTCTGACTGTGACTTTACTCAGCCTAGAGAACAAACGCCCCTCCTCACAATTTCCATTCTATGCAAAGTGTGTTTTATTTTTGTTGATATTGTTTCTTGGAGATGCTTGTATGATCTTATGCCAACATAACTCCACCAGGTGGATGCAGCACCAAATATGCATTCAAGAAGCAGACAGGGGGTCTGAGGGAGGGGGCGTGGTCCTCCTAGAAGTGCTCCCTGCTTCCTGTATGACGCTTTCACATAtcctgtgtctgaaatggcaccataTTTCGTATAtaattccctatgggccctgatcaaaagtgatgcactacatagggaataggatgccattgaAGATGCAGACTTGAACAGTGGAGTGTGCACAACAAGGAATGCTAGCCCAGTAGCTCGGTAGCATGGAATTGGATGCACACACACtttaaaacaaacaacaacaacatcttaaaaccaaccaagccgctgagGCTGCAAGCCATTCTATTTGAAGACTTGATTTCGGGGGACGATAATTAAATTACGTTTAAGATATTGCCCCACTCCTTCCCAGTTCTTTGTTAGTCTTATTCTATATTCAAAATGTTTTCGTGGCTATGTGGCTGACACATGTACGGTActtcaaattaaataaataaagaagTTATTTATCTAAGAAAGAATTATAAACTGATCCAAACTACGTTTTTTTCTTACCAACAGTAAGAATCAGTGACTCACTGATTGTAGAGCAAACTCGAAGTTGATTCAGCGTATTTTGGGGAATGTAATCACTAAtgaatgttacattttttttattaacatTTTCTTCTATAATTATTTTTGTAAACTTTAAACATCTCTGGTTTGTTGCCCACGGTAGCTGTCAGTCGGTCAGGCACTCAGGCACTCAGGTCACTGGTCTGTAGACTAATTGGTTTGTAACAAAGTTGGGGTCAGTTTTATTTCTATTCAGTCAATACAATAATCTGAAAATCTTAATGAGGAAatgttgaatttgaatttgaactGACTTTTCTGAATTAACTGAATGGAATGGAGCCCAATCCTGTTGTGTAATCCAATGGGTCTGTAGTCAAGTGAAACTCTCAGTCAGTCCATCGGTCACTGCTCCAACACTTCTCTCCGTACACACCAACGTTCACACAAACGTGCACAGCAATGTGCACGCGATGCCATCCCGTCTCAGTCTCGGTCCACATCCAGGGgcacctctgtctctctaacatTGTGTCACTTTTCTGGTGGTCATGTAAGAATCTCTCTTCTGTTCACGGGTAATTGtactttatttttacattttgtttcaACTTTTATTGTGTAAAGAGTTTTGATTCTTTAAAGAAAAAAAGCTTTTCTTGTTACTAATCTAGAAAATCACACAGCTATTATTTTCTTTGAGGAAGGAACATTATTTTGTTAAAATATAATTTGTATTTAATgtctttttaaaataaaaaaataaacactatTTTCATTTACTGTT

Function

NR:

description
insulin-like growth factor-binding protein 3 isoform X2

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K10138 IGFBP3; insulin-like growth factor-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604522.2 True 3897 mRNA 0.47 4 82275087 82346684

Neighbor

gene id symbol gene type direction distance location
LOC110524669 LOC106584070 coding downstream 385174 81843519 ~ 81889913 (-)
LOC110524665 slc22a23 coding downstream 507492 81639462 ~ 81767595 (-)
LOC110524664 LOC106560367 coding downstream 637496 81634363 ~ 81637591 (-)
LOC110524663 LOC106560370 coding downstream 685855 81580318 ~ 81589232 (-)
LOC110524661 LOC106560372 coding downstream 995894 81277266 ~ 81279193 (-)
si:ch211-191a24.3 LOC106560396 coding upstream 86531 82433215 ~ 82536323 (-)
si:ch211-191a24.4 LOC106560402 coding upstream 254776 82601460 ~ 82605684 (-)
LOC110524677 mafa coding upstream 620300 82966984 ~ 82974589 (-)
LOC110524678 LOC106560415 coding upstream 634765 82981449 ~ 83097063 (-)
adcyap1r1b adcyap1r1 coding upstream 894523 83241207 ~ 83306242 (-)
G447168 NA non-coding downstream 18265 82225729 ~ 82256822 (-)
G446919 NA non-coding downstream 60547 82212224 ~ 82214540 (-)
G446889 NA non-coding downstream 90729 82172640 ~ 82184358 (-)
G446885 NA non-coding downstream 116667 82157459 ~ 82158420 (-)
G446884 NA non-coding downstream 118857 82155203 ~ 82156230 (-)
G447204 NA non-coding upstream 2015 82348699 ~ 82349012 (-)
G447212 NA non-coding upstream 15245 82361929 ~ 82362182 (-)
G447216 NA non-coding upstream 23292 82369976 ~ 82370187 (-)
G447226 NA non-coding upstream 50999 82397683 ~ 82397894 (-)
G447232 NA non-coding upstream 64122 82410806 ~ 82411096 (-)
G446775 NA other downstream 331476 81943285 ~ 81943611 (-)
G445220 NA other downstream 2013582 80245943 ~ 80261505 (-)
LOC118964653 LOC106581256 other downstream 2048886 80223240 ~ 80233361 (-)
G445197 NA other downstream 2098007 80176762 ~ 80177080 (-)
G445115 NA other downstream 2287383 79982461 ~ 79987704 (-)
G447220 NA other upstream 43971 82390655 ~ 82391224 (-)
G447993 NA other upstream 970829 83315161 ~ 83319715 (-)
G448079 NA other upstream 1163669 83510353 ~ 83520273 (-)
G448411 NA other upstream 1524918 83871602 ~ 83873308 (-)
G448452 NA other upstream 1569452 83916136 ~ 83916641 (-)

Expression


Co-expression Network