LOC118964676


Basic Information

Item Value
gene id LOC118964676
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 85100248 ~ 85101922 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036978600.1
GGTAACTGGAGGGGGTTGAATCACTACAGCTCCTAACAGAGAAGGGgatgggaagggagaggaggaggcgtgAGGAGAGATGGAAATACCGGTGGGAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACATCCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACATCCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGGGTTACACAACCCCTAAACATGTATATCAGGTACTCCTAAAGAAGTAGTACTTTACCTTCAACACAGGAAGCCCAACATAATTTGTATGCTGTGAGTGTTCGCCGCTAATGTGCAAATTCACTCGACACAGT

Function

NR:

description
PREDICTED: proteoglycan 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036978600.1 True 1630 mRNA 0.41 2 85100248 85101922

Neighbor

gene id symbol gene type direction distance location
znhit6 znhit6 coding downstream 167126 84880003 ~ 84933122 (-)
ddah1 ddah1 coding downstream 238089 84709932 ~ 84862159 (-)
LOC110524711 cssa10h1orf52 coding downstream 402305 84693595 ~ 84697943 (-)
syde2 syde2 coding downstream 429790 84586021 ~ 84670458 (-)
mcoln3b LOC106560446 coding downstream 568937 84520767 ~ 84531311 (-)
LOC118964733 NA coding upstream 333207 85435129 ~ 85443236 (-)
lurap1 LOC106560455 coding upstream 341574 85443496 ~ 85472422 (-)
LOC110524719 ttc4 coding upstream 401045 85502967 ~ 85511477 (-)
sgip1a sgip1 coding upstream 429768 85531690 ~ 85652797 (-)
pde4ba pde4b coding upstream 580387 85682309 ~ 86031149 (-)
G450528 NA non-coding downstream 46910 85051940 ~ 85053338 (-)
G450525 NA non-coding downstream 52752 85047246 ~ 85047496 (-)
G450494 NA non-coding downstream 127052 84972788 ~ 84973196 (-)
G449522 NA non-coding downstream 232757 84867262 ~ 84867491 (-)
G449512 NA non-coding downstream 257089 84831205 ~ 84843159 (-)
G450640 LOC106560454 non-coding upstream 177402 85279324 ~ 85280531 (-)
G450643 LOC106560454 non-coding upstream 178612 85280534 ~ 85292644 (-)
G450671 NA non-coding upstream 235701 85337623 ~ 85337868 (-)
G450673 LOC106560414 non-coding upstream 236918 85338840 ~ 85339159 (-)
G450677 NA non-coding upstream 241440 85343362 ~ 85343680 (-)
G448452 NA other downstream 1183607 83916136 ~ 83916641 (-)
G448411 NA other downstream 1226940 83871602 ~ 83873308 (-)
G448079 NA other downstream 1579975 83510353 ~ 83520273 (-)
G447993 NA other downstream 1780533 83315161 ~ 83319715 (-)
G447220 NA other downstream 2709024 82390655 ~ 82391224 (-)
G450676 NA other upstream 240866 85342788 ~ 85343072 (-)
G450752 NA other upstream 384920 85486842 ~ 85487158 (-)
G450957 NA other upstream 775811 85877733 ~ 85878974 (-)
G451271 NA other upstream 1446916 86548838 ~ 86549878 (-)

Expression


Co-expression Network