LOC118964733


Basic Information

Item Value
gene id LOC118964733
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 85435129 ~ 85443236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979076.1
ATGCCTGGACATTCCAAGGCAGGGGTTGCCAGGatgacagagaggTGGGGAGGAGAGCTTACTACAGCACAGGGCTGGACAACATCAGGACAGGGTGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCCGGACAGGGTGGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGAGTTCCACCACAGAGGACAGCAAAGTGCTGGACAACATCAGGACAGGGTGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGAAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGGAGTTCCACCACAGAGGACAGCACAGGGCTGGACAACATCAGGACAGGGTGGGAGTGTTCCACCAAAGACTACAGCACAGGGCTGGACAACATCAGGACAGGGTGGAGTTCCAACCACAGAGGCTGCACAGCAGGAGATCCTGAGGAGATGGTTCTCTTGGATGTGTGTGGCTCGTTTGGTTTGGTTTATGGTTATAATGGTCCACACAGGGCAGACCACAATCCACACTGGACCACAAATCTCCTGGAATCTCTGTCCATGTCAGGAGAATACCAGCCCCAAACTGTTTCATATTACCTTGAATCTGGGGATAGTAACATTTATTGTTtggaaacttctgtatgtgtaatgtttactgtaaatttgattgtttatttcacttttgtatatttacctcacttgctttggcaatgttaacacatgtttcccatgccaataaagccccttgaattgaattgaatagtaACACCACAAGCCAACTCTTACAGCACTGCCTTGGGGAGACAGGACCATAAACCAGGGTAGTGGAGAATAACTTGATGGTTACAGACAGAGCTTTGTTTTCGACGTACTGTGTGTGGAAACCCTACTGTATCCCCTCTCTAAGACCAAACCCTAAACCCGTGTGGCCTGCCTCCTAGTCTCTCACATTCATATTCTGCTCTCAAACCACAGTGACAGAAAAAAAACTCATCTCTATCTGGAGTCTGGCATACGTGTTGTTTTGCTCTGCCTTTAAATTAAGCAGTATCACACTAAGAGCCACATTCTTGTAGTATTTTCATATTTACAGTATATTTCTCCTGGTTTGTCCGCAGTGAGTACTCTCTCTCCACATCCTGGAATGCAGCTATAGTTATCATATTAttgggttagcagtgtggtgtgtatgtgtgtgtgtgctactctgGGGGAAGCCTCTCTATGGGATTCGTGAAGTAAACAAAGGGGCCAAAATAGGCCACAGTGTTCCCACAAAGTGATGCAATCAGACGTGGGTAGAGGTTAGAGACGGAATCCAAGGGGGAGTTGTTGTTCAATCTCTACCGC

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979076.1 True 1661 mRNA 0.50 3 85435129 85443236

Neighbor

gene id symbol gene type direction distance location
LOC110524715 col24a1 coding downstream 259692 84934006 ~ 85175437 (-)
LOC118964676 NA coding downstream 333207 85100248 ~ 85101922 (-)
znhit6 znhit6 coding downstream 502007 84880003 ~ 84933122 (-)
ddah1 ddah1 coding downstream 572970 84709932 ~ 84862159 (-)
LOC110524711 cssa10h1orf52 coding downstream 737186 84693595 ~ 84697943 (-)
lurap1 LOC106560455 coding upstream 260 85443496 ~ 85472422 (-)
LOC110524719 ttc4 coding upstream 59731 85502967 ~ 85511477 (-)
sgip1a sgip1 coding upstream 88454 85531690 ~ 85652797 (-)
pde4ba pde4b coding upstream 239073 85682309 ~ 86031149 (-)
LOC118964679 NA coding upstream 627967 86071203 ~ 86071878 (-)
G450679 LOC106560414 non-coding downstream 24157 85344855 ~ 85410972 (-)
G450683 NA non-coding downstream 86930 85346933 ~ 85348199 (-)
G450677 NA non-coding downstream 91449 85343362 ~ 85343680 (-)
G450673 LOC106560414 non-coding downstream 95970 85338840 ~ 85339159 (-)
G450671 NA non-coding downstream 97261 85337623 ~ 85337868 (-)
G450767 NA non-coding upstream 82575 85525811 ~ 85527502 (-)
G450790 NA non-coding upstream 139530 85582766 ~ 85612910 (-)
G450801 NA non-coding upstream 172744 85615980 ~ 85619096 (-)
G450818 NA non-coding upstream 199600 85642836 ~ 85643526 (-)
G450676 NA other downstream 92057 85342788 ~ 85343072 (-)
G448452 NA other downstream 1518488 83916136 ~ 83916641 (-)
G448411 NA other downstream 1561821 83871602 ~ 83873308 (-)
G448079 NA other downstream 1914856 83510353 ~ 83520273 (-)
G447993 NA other downstream 2115414 83315161 ~ 83319715 (-)
G450752 NA other upstream 43606 85486842 ~ 85487158 (-)
G450957 NA other upstream 434497 85877733 ~ 85878974 (-)
G451271 NA other upstream 1105602 86548838 ~ 86549878 (-)
G451286 NA other upstream 1154116 86597352 ~ 86597744 (-)

Expression


Co-expression Network