Item | Value |
---|---|
gene id | lurap1 |
gene name | LOC106560455 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 85443496 ~ 85472422 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: dirigent protein 10-like isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036978603.1 | False | 3758 | mRNA | 0.45 | 2 | 85443496 | 85472422 |
TU510133 | False | 1031 | TUCP | 0.48 | 2 | 85445681 | 85471880 |
TU510128 | False | 612 | lncRNA | 0.52 | 3 | 85445878 | 85446785 |
TU510129 | False | 612 | lncRNA | 0.52 | 3 | 85445878 | 85446785 |
TU510130 | False | 612 | lncRNA | 0.52 | 3 | 85445878 | 85446785 |
TU510132 | False | 649 | lncRNA | 0.52 | 2 | 85445878 | 85446785 |
TU510134 | False | 871 | lncRNA | 0.51 | 2 | 85445878 | 85446785 |
TU510135 | False | 686 | lncRNA | 0.52 | 3 | 85445878 | 85446785 |
TU510137 | False | 834 | lncRNA | 0.51 | 2 | 85445878 | 85446785 |
TU510138 | False | 723 | lncRNA | 0.51 | 3 | 85445878 | 85446785 |
TU510139 | False | 723 | lncRNA | 0.52 | 2 | 85445878 | 85446785 |
TU510140 | False | 575 | lncRNA | 0.52 | 2 | 85445878 | 85446785 |
TU510141 | True | 723 | lncRNA | 0.52 | 2 | 85445878 | 85446785 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118964733 | NA | coding | downstream | 260 | 85435129 ~ 85443236 (-) |
LOC110524715 | col24a1 | coding | downstream | 268059 | 84934006 ~ 85175437 (-) |
LOC118964676 | NA | coding | downstream | 341574 | 85100248 ~ 85101922 (-) |
znhit6 | znhit6 | coding | downstream | 510374 | 84880003 ~ 84933122 (-) |
ddah1 | ddah1 | coding | downstream | 581337 | 84709932 ~ 84862159 (-) |
LOC110524719 | ttc4 | coding | upstream | 30545 | 85502967 ~ 85511477 (-) |
sgip1a | sgip1 | coding | upstream | 59268 | 85531690 ~ 85652797 (-) |
pde4ba | pde4b | coding | upstream | 209887 | 85682309 ~ 86031149 (-) |
LOC118964679 | NA | coding | upstream | 598781 | 86071203 ~ 86071878 (-) |
LOC110524724 | lepr | coding | upstream | 614771 | 86087193 ~ 86174451 (-) |
G450679 | LOC106560414 | non-coding | downstream | 32524 | 85344855 ~ 85410972 (-) |
G450683 | NA | non-coding | downstream | 95297 | 85346933 ~ 85348199 (-) |
G450677 | NA | non-coding | downstream | 99816 | 85343362 ~ 85343680 (-) |
G450673 | LOC106560414 | non-coding | downstream | 104337 | 85338840 ~ 85339159 (-) |
G450671 | NA | non-coding | downstream | 105628 | 85337623 ~ 85337868 (-) |
G450767 | NA | non-coding | upstream | 53389 | 85525811 ~ 85527502 (-) |
G450790 | NA | non-coding | upstream | 110344 | 85582766 ~ 85612910 (-) |
G450801 | NA | non-coding | upstream | 143558 | 85615980 ~ 85619096 (-) |
G450818 | NA | non-coding | upstream | 170414 | 85642836 ~ 85643526 (-) |
G450825 | NA | non-coding | upstream | 183112 | 85655534 ~ 85655803 (-) |
G450676 | NA | other | downstream | 100424 | 85342788 ~ 85343072 (-) |
G448452 | NA | other | downstream | 1526855 | 83916136 ~ 83916641 (-) |
G448411 | NA | other | downstream | 1570188 | 83871602 ~ 83873308 (-) |
G448079 | NA | other | downstream | 1923223 | 83510353 ~ 83520273 (-) |
G447993 | NA | other | downstream | 2123781 | 83315161 ~ 83319715 (-) |
G450752 | NA | other | upstream | 14420 | 85486842 ~ 85487158 (-) |
G450957 | NA | other | upstream | 405311 | 85877733 ~ 85878974 (-) |
G451271 | NA | other | upstream | 1076416 | 86548838 ~ 86549878 (-) |
G451286 | NA | other | upstream | 1124930 | 86597352 ~ 86597744 (-) |
ror1 | LOC106560470 | other | upstream | 1293161 | 86763372 ~ 87043134 (-) |