jak1 (jak1)


Basic Information

Item Value
gene id jak1
gene name jak1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 86264428 ~ 86343384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036978622.1
TGCACCAATCAGAATGCGTGAAGCTGAGCATGATGCACTATTTTCGGGAATAGGGACGATACTTGACAGGAAGGGTTAGCTAGAAAGATTATGTATGTGCTTTCGACCAGAAAGGAAAGAAACTCGTCGGGCAAAAACAAATTCGTTTGGAATATTGACATGACTAAGGATATTTTCTTGTCAAGATCAACTCAGTCTTTATAGTTTCACAACGGATAATTATATTCTGGATCTACGAACTGAACGATACGGAAGTAAACTTGCCATCTGGCTAGCTTGCTAACGGCTAGaGTCTGGATGCCAAGTCTGGGGGTGATGGAGCTGGGCAGGCAACTGTGTGGGAAGATGAGGAGGTCAAGGAGGGCCGAGGGCCCCGTCACTGTGACCATGAGAGGTCTGGAGATTCATTTCTACCTACCAGATACTCACCCGCTGCAGTTCCTCAAAGACTGCTTCACCGCTGAGGAGCTGTGTGTGGAGGCCGCCAAAAGATGCTatatCTCCCCCCTGTGCTGTAATCTGTTTGGTCTGTATGATGAGAACCAACAGCTGTGGTACGCTCCCAACCACGTCATCAAGGTTACTGACGAGACCTGCATCAAGCTGCACTACCGCATGAGgtTTTACTTCACTAACTGGCATGGTACCAGTGAGCGTGAGTCTCCAGTGTGGAGACACTGTATCAGTAAGCTGAGGGGAGGTCTCGGCCCACAGAGGGCCCCTGAAGGTATACCCCTACTGGACGCGGCCTCCCTTGACTACCTGTTCGCCCAGGGCCAGAATGATTTCCAGAAGGGTCTTGCTGTGGTTCGTTGCCCCCAGAGTGAGGCAGAGCAGCATGAGATAGAGAATGAGTGCCTGGGCATGGCTGTACTGGCCATCACTCACTATGCTATGACCAGAGAGATTCCCCTGTCTACTGCCTCCAATGAGATCAGctacAAGCGTTTCATCCCGGAGAAACTGAACAGGCAAATCAAACAGCGGAACATTCTCACCCGGCTCCGCATCAACAACGTCTTCAAGAACTTCCTGAATGAGTTCAACAGTCGCACTGTTCAGGACAGTAACATCACACtgtacgacctgaagatcaagtACCTGTCCACCCTGGAAGGCCTGACCCGGGGCCTGGGGAGGGAGATGCTGGAGCCCAGGGCCCTGGTAGTTACCCAAGAGGTAGAGACCAATGGGGAGCTGAGCCACAGGCCTGAGTCCTCCCTGGCCATGGAGGTCCAGGTTACTGGCACCACAGGGATATCATACAGGAGGAAGCCCCCTAATAATACCTTGATCCTGAAGGAAAAGAACAAGTCCAAAAAGAACAAGTTTGAGGGCAAACAGACCAAGAAGAACGACGCCAGCGAAGGCTGGGTGACATTCTGTGACTTCCACGAGATCACACACATTGTCATCAAAGAGTCCACTGTCACCATCTTCAGACAGGATAACAAGAAGATGGAGGTGCAGCTGGAGTTTAAAGGAGAGGCGCTGGCGTTCGCTGCCCTGGTGGATGGGTACTTCCGTCTGACAGTAGATGCCCATCACTACCTGTGTACAGAGGTGGCCCCTTCCTCTGTGGTGCAGAACCTACAGAACTGCTGTCATGGACCTATCTGTACGGAGTACGCCAACCAGAAGCTTCGTCAGGAGGGCAACGAGGAGGGAACCTACGTCCTGCGCTGGTCCTGTACTGACTACCATTACATCATCATGACCGTGGTCTGCAgcgagTTGGATCTGTGTGAGTCGAGACAGGTGCGTCAGTATAAGAACTTCCAGATCGAGGTGGGTTCAGAGGGTTTTCGTCTGTACGGGACAGAGACCTACAGGTCATCTCTCAGAGAGCTGCTAGACCACCTGTCTGGACAGAACCTCCGTACCGACAACCTCCGCTTCCAGCTCAGCCGCTGCTGCCCCCCACAGcccagagAGGTGTCCAACCTGCTGGTGGTGACTAAGGACAGAGTGCTGGTTCCCCAAACAACCCTGCAGGAGAGTCAACTGAGCTTCCACAGGATTCTCAAGGAGGAGATCATGCAGGGAGAGCACCTGGGGCTGGGTACCCGGACCAACATCTATGCTGGAGTACTGAAGGTGAAGAGTGAGGAGGATGCAGGATACTATCCCTCTCAGGAGCTCAAAGTAGTGCTGAAGGTGTTGGggtctggacacagagacatcTCCCTGgccttTTTTGAGACAGCTAGTATGATGCGGCAGGTCTCCCATAAGCACATCGCCCTGCTCTATGGAGTCTGTGTACGCCACCTTGAGaataTCATGGTGGAGGAGTTTGTCCAGTTAGGTCCGTTGGATATGTTCATGCGGAGACAACACAGTCCTCTCAGTACACCATGGAAGTTCCAGGTGGCCAAACAACTGGCCAGCGCTCTCAGCTACCTGgAGGATAAGAAGCTAGTGCATGGCTTTGTGTGTACCAAGAACATCCTGCTGGCCAGAGACGGAGTGGACAGTGAGGGAGGACCCTTCATCAAGCTCAGCGACCCCGGCATACCCATCACTGTGTTGACCAGAGAGGAGTGTGTGGACCGGATCCCCTGGATTGCTCCAGAGTGTGTGAAGGACTCTGCCAACCTGAGTGTAGCGGCTGATAAATGGGGATTCGGCACAACACTGTGGGAGATCTGCTATGACGGAGAAGTGCCCCTTAAAGACAAGAAACTCACAGagAAAGAAAGGTTCTATGCAGCAGAGTGTCAGCTAGCTACTCCAGACTGCAAAGAGCTGGCTGAACTGATGACCCATTGTATGACCTTTGACCCCCGTAAACGCCCGTTCTTCAGGGCCATCGTCAGAGACATAGACACCCTTGAGGAAcagaACCCCTCTATCAAGCCTGTACCCACTCTGGAGGTCGACCCCACTGTGTTCGAGAAGAGGTTCCTCAAGAAGATTCGAGATTTAGGAGAGggtcacTTTGGCAAGGTGGAGCTGTGTCGGTATGACCCCAGAGGGGACCGGACAGGGGAGCTGGTAGCAGTGAAGAGTTTAAAGCcagagaacagagaggaacagagcagCAACCTCTGGTGTGAGATAGGAATCCTTAAAGAACTTTACCACCACAACATTGTCAAGTACAAAGGCATCTGTCAGGAGGAGGGAGGCAGAGCCATCAAGTTGATCATGGAGTACCTGCCTGCTGGCAGTCTTAAGGAGTACCTCCCTCGCAACAAAAGCCAGACCAGCCTGAAGAGACTGCTCAGTTACGCTGTCCAGATCTGTCAGGGAATGGACTATCTGGGATCTCGGAATTACATCCACCGGGATCTGGCGGCCCGGAACGTTCTGGTGGAGAACGAGAGCACGGTGAAGATCGGAGATTTTGGACTGACCAAGAGCATCAAGGACAACGAGGGATATTACACGGTCAAAGATGACCTGGACAGCCCTGTGTTctgGTATGCCCCAGAGTGTCTGGTCCACTGTAAGTTCTACCTGGCCTCTGATGTCTGGTCCTTCGGTGTCACGATGTATGAACTCCTCACCTACTGTGACTCTGCCATCAGCCCCATGACGGTGTTCTTGAAGATGATTGGTCCCACTCAGGGTCAGATGACTGTTACGCGATTGGTCAAGGCgctggaggagggaaagaggctGCCCCGCCCTGAGAGCTGTCCTGGAACGGTGTATGAGCTGATGAGGAAGTGTTGGGAGAGCACCCCTGACAGGAGGATCACCTTCAAGAGCCTCATCGACGAGTTCACCCGCATGCTTGCCAACAACAGCTTGTAACCACAGCAACTACCCTCTACGCAAAGCCTTACCTACCACTGATACAATCCCAGGGGTCAAGGGTGAAAGGTTAAGGGTCACAGACTATGGTGACCTggaccaaaaaaacaacaaaatcagTGCTGCT

Function

symbol description
jak1 Predicted to enable ATP binding activity; metal ion binding activity; and non-membrane spanning protein tyrosine kinase activity. Acts upstream of or within T cell differentiation in thymus. Predicted to be located in cytoskeleton; endomembrane system; and membrane. Is expressed in cranial ganglion; otic vesicle; somite; and vasculature. Human ortholog(s) of this gene implicated in T-cell acute lymphoblastic leukemia; colorectal cancer; hepatocellular carcinoma; ovarian cancer; and pancreatic adenocarcinoma. Orthologous to human JAK1 (Janus kinase 1).

NR:

description
tyrosine-protein kinase JAK1

GO: NA

KEGG:

id description
K11217 JAK1; Janus kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036978622.1 True 3889 mRNA 0.53 24 86264428 86343384

Neighbor

gene id symbol gene type direction distance location
LOC110524728 NA coding upstream 2276 86259980 ~ 86262152 (+)
LOC118964753 NA coding upstream 38483 86225891 ~ 86225945 (+)
LOC118964678 NA coding upstream 605520 85656730 ~ 85659355 (+)
dnai4 wdr78 coding upstream 738478 85511643 ~ 85525950 (+)
ttc22 ttc22 coding upstream 762096 85498203 ~ 85502332 (+)
LOC118964680 NA coding downstream 21355 86364739 ~ 86368940 (+)
si:dkey-148h10.5 LOC106560479 coding downstream 750650 87094034 ~ 87107836 (+)
dock7 LOC106560483 coding downstream 1058386 87401770 ~ 87493654 (+)
kank4 kank4 coding downstream 1178321 87520224 ~ 87666404 (+)
dmrt2b LOC106560523 coding downstream 1828375 88171759 ~ 88177340 (+)
G450214 dnajc6 non-coding upstream 45993 86202169 ~ 86218435 (+)
G450199 NA non-coding upstream 73949 86161421 ~ 86190479 (+)
G450181 NA non-coding upstream 132070 86132077 ~ 86132358 (+)
G450023 NA non-coding upstream 418305 85845593 ~ 85846123 (+)
G450237 NA non-coding downstream 5971 86349355 ~ 86352935 (+)
G450293 NA non-coding downstream 37510 86380894 ~ 86385760 (+)
G450297 NA non-coding downstream 52379 86395763 ~ 86395994 (+)
G450304 NA non-coding downstream 58972 86402356 ~ 86402691 (+)
G450308 NA non-coding downstream 62338 86405722 ~ 86405947 (+)
G449809 NA other upstream 816853 85445964 ~ 85447575 (+)
G449774 NA other upstream 935486 85328572 ~ 85328942 (+)
LOC118964674 NA other upstream 1874827 84386803 ~ 84389601 (+)
G448698 NA other upstream 1961955 84302100 ~ 84302473 (+)
LOC110524684 NA other upstream 2470075 83788574 ~ 83794357 (+)
G450333 NA other downstream 125154 86468538 ~ 86468937 (+)
G450331 NA other downstream 211089 86554473 ~ 86558452 (+)
G450394 NA other downstream 252763 86596147 ~ 86596515 (+)
G451408 LOC106584030 other downstream 500492 86843876 ~ 86844271 (+)

Expression


Co-expression Network