Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522895 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 87657929 ~ 87659520 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109879133 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051885.1 | True | 1442 | mRNA | 0.50 | 2 | 87657929 | 87659520 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| usp1 | usp1 | coding | downstream | 137879 | 87505749 ~ 87520050 (-) |
| angptl3 | LOC106584028 | coding | downstream | 233861 | 87419230 ~ 87424068 (-) |
| atg4c | atg4c | coding | downstream | 256516 | 87391661 ~ 87401413 (-) |
| foxd3 | foxd3 | coding | downstream | 504110 | 87151825 ~ 87153819 (-) |
| alg6 | alg6 | coding | downstream | 513588 | 87108000 ~ 87144341 (-) |
| LOC110523029 | LOC106584023 | coding | upstream | 25693 | 87685213 ~ 88049103 (-) |
| LOC110524751 | LOC106560521 | coding | upstream | 603055 | 88262575 ~ 88268140 (-) |
| ap1m3 | LOC106560519 | coding | upstream | 646408 | 88305928 ~ 88348088 (-) |
| c5h1orf210 | LOC106560518 | coding | upstream | 688813 | 88348333 ~ 88355068 (-) |
| orc1 | orc1 | coding | upstream | 742410 | 88401930 ~ 88412796 (-) |
| G452248 | NA | non-coding | downstream | 163969 | 87493136 ~ 87493960 (-) |
| G452274 | NA | non-coding | downstream | 190334 | 87466904 ~ 87467595 (-) |
| G451940 | NA | non-coding | downstream | 269390 | 87388269 ~ 87388539 (-) |
| G451936 | NA | non-coding | downstream | 274446 | 87383254 ~ 87383483 (-) |
| G451935 | NA | non-coding | downstream | 274831 | 87382886 ~ 87383098 (-) |
| G452370 | NA | non-coding | upstream | 32563 | 87692083 ~ 87692343 (-) |
| G452375 | NA | non-coding | upstream | 46757 | 87706277 ~ 87706486 (-) |
| G452376 | NA | non-coding | upstream | 47129 | 87706649 ~ 87706934 (-) |
| G452379 | NA | non-coding | upstream | 50108 | 87709628 ~ 87709898 (-) |
| G452380 | NA | non-coding | upstream | 52218 | 87711738 ~ 87712040 (-) |
| G452255 | NA | other | downstream | 158793 | 87498366 ~ 87499136 (-) |
| G451856 | NA | other | downstream | 414696 | 87241854 ~ 87243233 (-) |
| ror1 | LOC106560470 | other | downstream | 891942 | 86763372 ~ 87043134 (-) |
| G451286 | NA | other | downstream | 1060185 | 86597352 ~ 86597744 (-) |
| G451271 | NA | other | downstream | 1108051 | 86548838 ~ 86549878 (-) |
| G452442 | NA | other | upstream | 200607 | 87860127 ~ 87866464 (-) |
| G452457 | NA | other | upstream | 235212 | 87894732 ~ 87895212 (-) |
| G452504 | NA | other | upstream | 324440 | 87983960 ~ 87984633 (-) |
| G452517 | NA | other | upstream | 346399 | 88005919 ~ 88006587 (-) |
