LOC118964684


Basic Information

Item Value
gene id LOC118964684
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90846984 ~ 90848592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051891.1
tTTGTCAGGAAGAGAGAGCTTCTTTGCTGTCTTGTGTTGGTTGTTGCCCAGTGACAGTTCTGTTGACACTATTTGGTAGCCGCTACTTCTAAGgtaagacctggatggactaccccctgtattttggttggTGCGCCAGGAGGTTCTGaaaggttagggcaaacccggacgacgctgggccaattgtgcgcctccttATGTGACTCCctatcactgccggttgtgatacagccttgaatcgaaccagggtgCCGCCTCaagctctgagatgcagtgccttagaccctcaagcgctgagatgcagtgccttagaccgctgcaccactcggcaGCCCCTCATGCAAGGGTTTGTCCATTATTAGCCTATGACCTAAACAAAACATTATATCAAATGTTTGCTTGCATATAATTGAAGGTCAATATTCCTGCCTTAATGTTCAGGAGTACATGTCAAGGAACACCACAGGGACATTTTAATAGATATAGTCTGGTGGCTTCAGTATAAAATACTTGATGAAATTCCTAGACTAAAgggtaaataaaaacacattcatGTTGTACAATCAATTATATATGGATGTGTTTGTCCTAGACTAAAGAGTAGATAAAAACACATTCATGTTGTACAATCAATTATATATGGATGTGTTTGTCCTAGACTAAAGAGTAGATAAAAACACATTCATGTTGTACAATCAATTATATATGGATGTGTTTGTCCTAGACTAAAGAGTAGATAAAAACACATTCATGTTGTACAATCAATTATATATGGATGTGTTTGTCCAAGACAGTTTCCAGTAATCACTTCCAGTAAGCTGAGATTGCCAGAGGCAagaagtaaaacaaaaaaagcaTGACCAACTGAGACATTACTTACACTGTCCTGAGACCCTGGAGAAGATCTACTCTAGTAGCTACAGGTGCATGATAAGAGACAACTGGTTTACAACAACAATCAATGACAAGTGATACTGACCTGAGAAATAGTTTGTCAGCTTTAATGTGCATTTGTTAGGTTAACATCTGTAAATCTTATTCTGTTGTACTGTAGCCTTGTAAAGACTCATGGAGACAACGTGTCGTCTCTTTTCCACAACTTTATTGTCTTGATAAGGTCAATCACAATCATAAGTTGTTCACTTATATTACACCTTGAGGTAATGAATCACACAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051891.1 True 1177 mRNA 0.40 3 90846984 90848592

Neighbor

gene id symbol gene type direction distance location
LOC110524788 LOC106560550 coding upstream 32619 90809543 ~ 90814365 (+)
cfh cfh coding upstream 67958 90756155 ~ 90779026 (+)
pdcb LOC106560557 coding upstream 520603 90312368 ~ 90326381 (+)
ptgs2b ptgs2b coding upstream 574775 90265570 ~ 90272209 (+)
hmcn1 LOC106560561 coding upstream 653401 89970059 ~ 90193583 (+)
LOC118964685 NA coding downstream 29739 90878331 ~ 90880383 (+)
LOC118964686 NA coding downstream 61766 90910358 ~ 90912406 (+)
LOC110524786 LOC100136131 coding downstream 99790 90948382 ~ 90979079 (+)
LOC110523038 LOC106560551 coding downstream 155968 91004560 ~ 91072132 (+)
LOC118964687 NA coding downstream 224214 91072806 ~ 91075802 (+)
G455176 NA non-coding upstream 17634 90828703 ~ 90829350 (+)
G455173 NA non-coding upstream 18835 90826923 ~ 90828149 (+)
G455172 NA non-coding upstream 43932 90800456 ~ 90803052 (+)
G455158 NA non-coding upstream 87739 90754282 ~ 90759245 (+)
G455156 NA non-coding upstream 95362 90751415 ~ 90751622 (+)
G455181 NA non-coding downstream 5612 90854204 ~ 90893194 (+)
G455182 NA non-coding downstream 33720 90882312 ~ 90912619 (+)
G455195 NA non-coding downstream 117841 90966433 ~ 90970085 (+)
G455196 NA non-coding downstream 131498 90980090 ~ 90980414 (+)
G455197 NA non-coding downstream 132662 90981254 ~ 90981462 (+)
G455168 NA other upstream 56773 90788518 ~ 90790211 (+)
G454751 NA other upstream 399028 90446695 ~ 90447956 (+)
G453547 NA other upstream 1246288 89599964 ~ 89600696 (+)
G453429 NA other upstream 1460514 89385225 ~ 89386470 (+)
G452697 NA other upstream 2542535 88303307 ~ 88304449 (+)
G455203 LOC106560548 other downstream 145273 90993865 ~ 90994299 (+)
G455211 NA other downstream 212498 91061090 ~ 91062621 (+)
G455469 NA other downstream 639153 91487745 ~ 91489990 (+)
dda1 LOC106560571 other downstream 829513 91678060 ~ 91681757 (+)
G456139 LOC106560602 other downstream 1094562 91943154 ~ 92000758 (+)

Expression


Co-expression Network