LOC118964685


Basic Information

Item Value
gene id LOC118964685
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90878331 ~ 90880383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051892.1
tgttcatTTGTCAGGAAGAGAGAGCTTCTTTGCTGTCTTGTGTTGGTTGTTGCCCAGTGACAGTTCTGTTGACACTATTTGGTAGCCGCTACTTCTAAGgtaagacctggatggactaccccctgtattttggttggTGCGCCAGGAGGTTCTGaaaggttagggcaaacccggacgacgctgggccaattgtgcgcctccttATGTGACTCCctatcactgccggttgtgatacagccttgaatcgaaccagggtgCCGCCTCaagctctgagatgcagtgccttagaccctcaagcgctgagatgcagtgccttagaccgctgcaccactcggcaGCCCCTCATGCAAGGTTTCCAGTAATCACTTCCAGTAAGCTGAGATTGCCAGAGGCAagaagtaaaacaaaaaaagcaTGACCAACTGAGACATTACTTATACTGTCCTGAGACCCTGGAGAAGATCTACTCTAGTAGCTACAGGTGCATGATAAGAGACAACTGGTTTACAACAACAATCAATGACAAGTGATACTGACCTGAGAAATAGTTTGTCAGCTTTAATGTGCATTTGTTAGGTTAACATCTGTAAATCTTATTCTGTTGTACTGTAGCCTTGTAAAGACTCATGGAGACAACGTGTCGTCTCTTTTCCACAACTTTATTGTCTTGATAAGGTCAATCACAATCATAAGTTGTTCACTTATATTACACCTTGAGGTAATGAATCACACAGCTGGGAGATACAGGAGAATATTCACACATTATAGAGCGTGTcggtctaatcctgaatgttgATTAGTTAAAACGGCATTCCACCCGGTGCATATTCCACAAgctaccaccggctaaatctatgactttaaaatgcctatttactctgttccaactgactgcgcaatccactgtctcatcagcccagccaggcaatttataaacttgatagAATGTTCACACAATCACATCTCTTTGTACTAATACAACAAATGTACCATTTTAGTCTAGCTTTAGATAGCTGTACTGTTATTATAGTGAAGCTGAGACTGATGATTAGAAAGATACTGTTATTTTGTTACAATGGTACAAAGTCAAATGATGAAAAATACACCTTATGTGCTCCATTACTGGATGGCTCACATTTTTTCTAAACCTGAATTAAACAAGCGACAACAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051892.1 True 1173 mRNA 0.42 4 90878331 90880383

Neighbor

gene id symbol gene type direction distance location
LOC118964684 NA coding upstream 29739 90846984 ~ 90848592 (+)
LOC110524788 LOC106560550 coding upstream 63966 90809543 ~ 90814365 (+)
cfh cfh coding upstream 99305 90756155 ~ 90779026 (+)
pdcb LOC106560557 coding upstream 551950 90312368 ~ 90326381 (+)
ptgs2b ptgs2b coding upstream 606122 90265570 ~ 90272209 (+)
LOC118964686 NA coding downstream 29975 90910358 ~ 90912406 (+)
LOC110524786 LOC100136131 coding downstream 67999 90948382 ~ 90979079 (+)
LOC110523038 LOC106560551 coding downstream 124177 91004560 ~ 91072132 (+)
LOC118964687 NA coding downstream 192423 91072806 ~ 91075802 (+)
LOC118964734 NA coding downstream 403855 91284238 ~ 91285565 (+)
G455178 NA non-coding upstream 13079 90833680 ~ 90865252 (+)
G455174 NA non-coding upstream 19580 90827188 ~ 90858751 (+)
G455176 NA non-coding upstream 48981 90828703 ~ 90829350 (+)
G455173 NA non-coding upstream 50182 90826923 ~ 90828149 (+)
G455172 NA non-coding upstream 75279 90800456 ~ 90803052 (+)
G455182 NA non-coding downstream 1929 90882312 ~ 90912619 (+)
G455195 NA non-coding downstream 86050 90966433 ~ 90970085 (+)
G455196 NA non-coding downstream 99707 90980090 ~ 90980414 (+)
G455197 NA non-coding downstream 100871 90981254 ~ 90981462 (+)
G455199 NA non-coding downstream 104697 90985080 ~ 90985969 (+)
G455168 NA other upstream 88120 90788518 ~ 90790211 (+)
G454751 NA other upstream 430375 90446695 ~ 90447956 (+)
G453547 NA other upstream 1277635 89599964 ~ 89600696 (+)
G453429 NA other upstream 1491861 89385225 ~ 89386470 (+)
G452697 NA other upstream 2573882 88303307 ~ 88304449 (+)
G455203 LOC106560548 other downstream 113482 90993865 ~ 90994299 (+)
G455211 NA other downstream 180707 91061090 ~ 91062621 (+)
G455469 NA other downstream 607362 91487745 ~ 91489990 (+)
dda1 LOC106560571 other downstream 797722 91678060 ~ 91681757 (+)
G456139 LOC106560602 other downstream 1062771 91943154 ~ 92000758 (+)

Expression


Co-expression Network