LOC118964686


Basic Information

Item Value
gene id LOC118964686
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 90910358 ~ 90912406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051893.1
tgttcatTTGTCAGGAAGAGAGAGCTTCTTTGCTGTCTTGTGTTGGTTGTTGCCCAGTGACAGTTCTGTTGACACTATTTGGTAGCCGCTACTTCTAAGgtaagacctggatggactaccccctgtattttggttggTGCGCCAGGAGGTTCTGaaaggttagggcaaacccggacgacgctgggccaattgtgcgcctccttATGTGACTCCctatcactgccggttgtgatacagccttgaatcgaaccagggtgCCGCCTCaagctctgagatgcagtgccttagaccctcaagcgctgagatgcagtgccttagaccgctgcaccactcggcaGCCCCTCATGCAAGGGTTTGTCCATTATTAGCCTATGACCTAAACAAAACATTATATCAAATGTTTGCTTGCATATAATTGAAGGTCAATATTCCTGCCTTAATGTTCAGGAGTACATGTCAAGGAACACCACAGGGACATTTTAATAGATATAGTCTGGTGGCTTCAGTATAAAATACTTGATGAAATTCCTAGACTAAAgggtaaataaaaacacattcatGTTGTACAATCAATTATATATGGATGTGTTTGTCCTAGACTAAAGAGTAGATAAAAACACATTCATGTTGTACAATCAATTATATATGGATGTGTTTGTCCTAGACTAAAGAGTAGATAAAAACACATTCATGTTGTACAATCAATTATATATGGATGTGTTTGTCCTAGACTAAAGAGTAGATAAAAACACATTCATGTTGTACAATCAATTATATATGGATGTGTTTGTCCAAGACAGTTTCCAGTAATCACTTCCAGTAAGCTGAGATTGCCAGAGGCAagaagtaaaacaaaaaaagcaTGACCAACTGAGACATTACTTACACTGTCCTGAGACCCTGGAGAAGATCTACTCTAGTAGCTACAGGTGCATGATAAGAGACAACTGGTTTACAACAACAATCAATGACAAGTGATACTGACCTGAGAAATAGTTTGTCAGCTTTAATGTGCATTTGTTAGGTTAACATCTGTAAATCTTATTCTGTTGTACTGTAGCCTTGTAAAGACTCATGGAGACAACGTGTCGTCTCTTTTCCACAACTTTATTGTCTTGATAAGGTCAATCACAATCATAAGTTGTTCACTTATATTACACCTTGAGGTAATGAATCACACAGCTGGGAGATACAGGAGAATATTCACACATTATAGAGCGTGTcggtctaatcctgaatgttgATTAGTTAAAACGGCATTCCACCCGGTGCATATTCCACAAgctaccaccggctaaatctatgactttaaaatgcctatttactctgttccaactgactgcgcaatccactgtctcatcagcccagccaggcaatttataaacttgatagAATGTTCACACAATCACATCTCTTTGTACTAATACAACAAATGTACCATTTTAGTCTAGCTTTAGATAGCTGTACTGTTATTATAGTGAAGCTGAGACTGATGATTAGAAAGATACTGTTATTTTGTTACAATGGTACAAAGTCAAATGATGAAAAATACACCTTATGTGCTCCATTACTGGATGGCTCACATTTTTTCTAAACCTGAATTAAACAAGCGACAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051893.1 True 1617 mRNA 0.39 3 90910358 90912406

Neighbor

gene id symbol gene type direction distance location
LOC118964685 NA coding upstream 29975 90878331 ~ 90880383 (+)
LOC118964684 NA coding upstream 61766 90846984 ~ 90848592 (+)
LOC110524788 LOC106560550 coding upstream 95993 90809543 ~ 90814365 (+)
cfh cfh coding upstream 131332 90756155 ~ 90779026 (+)
pdcb LOC106560557 coding upstream 583977 90312368 ~ 90326381 (+)
LOC110524786 LOC100136131 coding downstream 35976 90948382 ~ 90979079 (+)
LOC110523038 LOC106560551 coding downstream 92154 91004560 ~ 91072132 (+)
LOC118964687 NA coding downstream 160400 91072806 ~ 91075802 (+)
LOC118964734 NA coding downstream 371832 91284238 ~ 91285565 (+)
LOC110524795 LOC106560563 coding downstream 426441 91338847 ~ 91561585 (+)
G455181 NA non-coding upstream 17164 90854204 ~ 90893194 (+)
G455178 NA non-coding upstream 45106 90833680 ~ 90865252 (+)
G455174 NA non-coding upstream 51607 90827188 ~ 90858751 (+)
G455176 NA non-coding upstream 81008 90828703 ~ 90829350 (+)
G455173 NA non-coding upstream 82209 90826923 ~ 90828149 (+)
G455195 NA non-coding downstream 54027 90966433 ~ 90970085 (+)
G455196 NA non-coding downstream 67684 90980090 ~ 90980414 (+)
G455197 NA non-coding downstream 68848 90981254 ~ 90981462 (+)
G455199 NA non-coding downstream 72674 90985080 ~ 90985969 (+)
G455200 NA non-coding downstream 74019 90986425 ~ 90986644 (+)
G455168 NA other upstream 120147 90788518 ~ 90790211 (+)
G454751 NA other upstream 462402 90446695 ~ 90447956 (+)
G453547 NA other upstream 1309662 89599964 ~ 89600696 (+)
G453429 NA other upstream 1523888 89385225 ~ 89386470 (+)
G452697 NA other upstream 2605909 88303307 ~ 88304449 (+)
G455203 LOC106560548 other downstream 81459 90993865 ~ 90994299 (+)
G455211 NA other downstream 148684 91061090 ~ 91062621 (+)
G455469 NA other downstream 575339 91487745 ~ 91489990 (+)
dda1 LOC106560571 other downstream 765699 91678060 ~ 91681757 (+)
G456139 LOC106560602 other downstream 1030748 91943154 ~ 92000758 (+)

Expression


Co-expression Network