plvapb (plvap)


Basic Information

Item Value
gene id plvapb
gene name plvap
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 91824605 ~ 91828072 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021604712.2
AGAGCTTTTTGAAGGAGGGAAATTCCCCTGAGAAACCAAAGAGACCTCCATTGACTTTTCAATACCCTCTTCTTGACCACATCGACATCCAGCAGCGATGTACAGTGGCAACAGCTACTCACAGGCCAAGTTTGGTCTGGAGGCCAAGGACATCCACAAGGCAAAGGGAAAGAGCTGCGGCTATTACATGAGGgtggtcttcttcttctcctctctgatCCAGTCCCTCATCATCGTGAGCCTGGTGCTGTTCCTGGTCTACGGCCAGCCAGAGAAGTCTGCTGAAGAGAGGAGGGTAGTGGAGCTGGAGCAGAGTTTGAACAGGATCAGCGAGAACAACATTAACCTGAGGAAGGATAAAGCTGACCTGGGAGCTGCGCTGGGGGCCAGGAAGGCTGAGAAGACAGCCCTGGAGGGAGAGGTGGCCATGCTAAAGAAAGCAGCGAATGCCTCCGGGGAGCAGATCAGAGCCCTCATACTGAAAGCGAGCCAGTGTGAAACAGACAAGAGGAAAATAGAGATGAGCCGTGCTACCCATGTCCGGGGACCCACCACCCCTTTCATCTTCGCCACTCCTAACACTGAGGTAAAAACCCTCCAGTCTCTGAACTCCCAGCAGGCAGCAATAATCAAACTGATCGAAGCCAACTTCACCCAGACCAACCAGTACATCCGCATCGAGAGGGACAATGCCATCAAGGACCGTGACGCCCACAACCTTGAGACCATCTCTTTGCGTAGGGAGAACAACAACCTGAAGGAACACCTGAAACTCTACACCCAGAAGTGTAAAGAGGACTTTGCCAAGTCTCTGGAGGGGATCCAAATGGTGACCAGTAACTTCCTGGTGCGCATCGACAACCTGTTCCCCCACTCCATGACCTTTCACCTGACCTGTGAGAAGCAGACAGAGCAGATGGAGAACATCAGGGCCAGATGCTCCAACCTGTCTAAGGAGGTTGAGGACAAGTTCCAGAGATACCTGGACAACGTGGGGAACAAGGTGGCAAACATCCAGGCCCTGTCCAGTCGCCTGGAGGTCCAGAACAGCCATCTGACCCTTGACCTCCAGCAGTGTGTCCAAAACCGCAGCGCGATGGCGGCGGAGGGCAGCAGGCTGCTGTTAGAGATCCGGGAGAACCACGACAGGCAGGTAGAGACCCTGCTGAAGGAACAGAACCGGCTGAGGGAGGAGAagagcctgcagggagagagactgatTCTGAGGGAGGCTGAGGTCAAAACACTCAACGGGAATGTCGAGTCACTCACCACCGCTCTAACCAACTGCAACCCTAAGCTCACCGGCCAAAAGCCTCTCGGACTGATGTCAGCCTTGAAGGGGGGGCCATCCATTGCAGCACCAGTGATCAGTAAACCCCACATGGCGAGGTGAGGAGAGACGGGTGTGAGGAAGATGCCCCACTCACACAGCTCTACCTAGGCCATGACCGAGTGAGAAAATGAAGGCACTTACTGTTATGGTCCCTGGAGAATTGGGTGCGATGCCTTTCAGTGATCAATGTGTGCTCTTAGACCTTATAATGTCCATGTGTAAATACTACAGACACTATAGGTTGTATCTACTGTCCTACatcatgtacactgaacaaaaatataattgcaaCACGTGAAGGTGTTGTtgccatttttcatgagctgaaataaaagatctcagaaatgttccatatgtacaaaaaaaacgtatttctctcaaattgtgcacaaatttgtttacatccctgttagtgagcatttctcatttgccaaga

Function

symbol description
plvap Predicted to enable identical protein binding activity. Involved in MAPK cascade; positive regulation of cellular extravasation; and tumor necrosis factor-mediated signaling pathway. Located in cell surface. Colocalizes with caveola. Implicated in congenital diarrhea.

NR:

description
plasmalemma vesicle-associated protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021604712.2 True 1772 mRNA 0.51 6 91824605 91828072

Neighbor

gene id symbol gene type direction distance location
ano8b LOC106560570 coding downstream 52154 91681845 ~ 91772451 (-)
abhd8b abhd8 coding downstream 146666 91660827 ~ 91677939 (-)
lhx9 LOC106560546 coding downstream 508943 91302544 ~ 91315662 (-)
LOC110524793 nek7 coding downstream 532746 91131608 ~ 91291859 (-)
LOC118964688 NA coding downstream 715511 91105800 ~ 91109094 (-)
babam1 babam1 coding upstream 4309 91832381 ~ 91849143 (-)
LOC110524808 LOC106560602 coding upstream 150139 91973511 ~ 91980596 (-)
si:ch73-61d6.3 LOC106560577 coding upstream 177204 92005240 ~ 92045022 (-)
LOC110524822 NA coding upstream 801530 92629338 ~ 92630894 (-)
senp5 senp5 coding upstream 808783 92636855 ~ 92643037 (-)
G456071 NA non-coding downstream 44808 91779480 ~ 91779797 (-)
G456069 NA non-coding downstream 45833 91778554 ~ 91778772 (-)
G456063 NA non-coding downstream 53508 91770832 ~ 91771097 (-)
G456060 NA non-coding downstream 56818 91767520 ~ 91767787 (-)
G456056 NA non-coding downstream 64005 91760363 ~ 91760600 (-)
G456286 NA non-coding upstream 7715 91835787 ~ 91836552 (-)
G456295 NA non-coding upstream 34032 91862104 ~ 91863274 (-)
G456299 NA non-coding upstream 40656 91868728 ~ 91869129 (-)
G456315 NA non-coding upstream 75857 91903929 ~ 91904434 (-)
G456317 NA non-coding upstream 77208 91905280 ~ 91906412 (-)
G455713 NA other downstream 565621 91257107 ~ 91258984 (-)
G455649 NA other downstream 728270 91094709 ~ 91096335 (-)
G455600 NA other downstream 749842 91073996 ~ 91074763 (-)
G455630 NA other downstream 763620 91057457 ~ 91060985 (-)
LOC110524787 cfhr5 other downstream 922204 90818787 ~ 90902401 (-)
G456288 LOC106560576 other upstream 68564 91896636 ~ 91914788 (-)
G457385 NA other upstream 683847 92511919 ~ 92514384 (-)
G457422 NA other upstream 743907 92571979 ~ 92573894 (-)
G457423 NA other upstream 746311 92574263 ~ 92574754 (-)

Expression


Co-expression Network