Gene
RNA
| Item | Value |
|---|---|
| gene id | si:ch73-61d6.3 |
| gene name | LOC106560577 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 92005240 ~ 92045022 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: occludin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021604721.2 | False | 4701 | mRNA | 0.46 | 8 | 92005276 | 92045022 |
| TU516786 | False | 2360 | lncRNA | 0.41 | 3 | 92005240 | 92007813 |
| TU516787 | False | 2238 | lncRNA | 0.41 | 3 | 92005240 | 92007813 |
| TU516788 | False | 2177 | lncRNA | 0.41 | 3 | 92005240 | 92007813 |
| TU516789 | False | 2212 | lncRNA | 0.41 | 2 | 92005240 | 92007813 |
| TU516791 | False | 2210 | lncRNA | 0.41 | 2 | 92005240 | 92007813 |
| TU516792 | True | 2177 | lncRNA | 0.41 | 3 | 92005240 | 92007813 |
91,970,000
91,980,000
91,990,000
92,000,000
92,010,000
92,010,000
92,020,000
92,030,000
92,040,000
92,050,000
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524808 | LOC106560602 | coding | downstream | 24680 | 91973511 ~ 91980596 (-) |
| babam1 | babam1 | coding | downstream | 156133 | 91832381 ~ 91849143 (-) |
| plvapb | plvap | coding | downstream | 177204 | 91824605 ~ 91828072 (-) |
| ano8b | LOC106560570 | coding | downstream | 232825 | 91681845 ~ 91772451 (-) |
| abhd8b | abhd8 | coding | downstream | 327337 | 91660827 ~ 91677939 (-) |
| LOC110524822 | NA | coding | upstream | 584580 | 92629338 ~ 92630894 (-) |
| senp5 | senp5 | coding | upstream | 591833 | 92636855 ~ 92643037 (-) |
| anos1b | LOC105011985 | coding | upstream | 628672 | 92673694 ~ 92858324 (-) |
| cp | cp | coding | upstream | 957049 | 93002071 ~ 93041479 (-) |
| tm4sf18 | LOC106560593 | coding | upstream | 999876 | 93044898 ~ 93062301 (-) |
| G456341 | NA | non-coding | downstream | 7945 | 91995698 ~ 91997331 (-) |
| G456342 | NA | non-coding | downstream | 8904 | 91938534 ~ 91996372 (-) |
| G456343 | NA | non-coding | downstream | 19454 | 91940411 ~ 91985822 (-) |
| G456325 | NA | non-coding | downstream | 54302 | 91943140 ~ 91950974 (-) |
| G456367 | NA | non-coding | upstream | 38735 | 92083757 ~ 92084417 (-) |
| G456420 | NA | non-coding | upstream | 63883 | 92108905 ~ 92109990 (-) |
| G456425 | NA | non-coding | upstream | 73091 | 92118113 ~ 92118359 (-) |
| G456431 | NA | non-coding | upstream | 78238 | 92123260 ~ 92124328 (-) |
| G456433 | NA | non-coding | upstream | 89151 | 92134173 ~ 92134375 (-) |
| G456288 | LOC106560576 | other | downstream | 90488 | 91896636 ~ 91914788 (-) |
| G455713 | NA | other | downstream | 746292 | 91257107 ~ 91258984 (-) |
| G455649 | NA | other | downstream | 908941 | 91094709 ~ 91096335 (-) |
| G455600 | NA | other | downstream | 930513 | 91073996 ~ 91074763 (-) |
| G455630 | NA | other | downstream | 944291 | 91057457 ~ 91060985 (-) |
| G457385 | NA | other | upstream | 466897 | 92511919 ~ 92514384 (-) |
| G457422 | NA | other | upstream | 526957 | 92571979 ~ 92573894 (-) |
| G457423 | NA | other | upstream | 529361 | 92574263 ~ 92574754 (-) |
| G457491 | LOC106560589 | other | upstream | 880674 | 92881393 ~ 92931639 (-) |
