Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110524836 |
| gene name | rpl36 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 93221830 ~ 93225091 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| rpl36 | Predicted to be a structural constituent of ribosome. Acts upstream of or within brain development and regulation of cell cycle. Predicted to be located in cytoplasm and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in endodermal cell; intestine; liver; and pancreas. Orthologous to human RPL36 (ribosomal protein L36). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021604754.2 | False | 483 | mRNA | 0.52 | 4 | 93221830 | 93225006 |
| TU517396 | True | 492 | TUCP | 0.49 | 4 | 93221906 | 93225091 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tm4sf4 | LOC106560595 | coding | upstream | 123228 | 93092029 ~ 93098602 (+) |
| hps3 | hps3 | coding | upstream | 220449 | 92968501 ~ 93001381 (+) |
| si:ch211-284e20.8 | LOC106560590 | coding | upstream | 267632 | 92942035 ~ 92957717 (+) |
| fetub | LOC106560589 | coding | upstream | 290212 | 92927124 ~ 92931618 (+) |
| ahsg1 | LOC106560588 | coding | upstream | 314651 | 92881372 ~ 92907179 (+) |
| enc3 | LOC106560599 | coding | downstream | 26623 | 93251629 ~ 93267778 (+) |
| LOC118964735 | NA | coding | downstream | 400426 | 93625432 ~ 93628212 (+) |
| LOC110524846 | LOC106560502 | coding | downstream | 497654 | 93722660 ~ 93780941 (+) |
| olfml2ba | LOC106560501 | coding | downstream | 556341 | 93781347 ~ 93797306 (+) |
| rxrgb | LOC106560629 | coding | downstream | 715012 | 93940018 ~ 94018526 (+) |
| G456844 | NA | non-coding | upstream | 47629 | 93170848 ~ 93174201 (+) |
| G456843 | NA | non-coding | upstream | 51998 | 93169480 ~ 93169832 (+) |
| G456842 | NA | non-coding | upstream | 54083 | 93167525 ~ 93167747 (+) |
| G456802 | NA | non-coding | upstream | 132078 | 93089527 ~ 93089752 (+) |
| G456788 | NA | non-coding | upstream | 148952 | 93072660 ~ 93072878 (+) |
| G456869 | lonp1 | non-coding | downstream | 9234 | 93234240 ~ 93235372 (+) |
| G456898 | NA | non-coding | downstream | 66837 | 93291843 ~ 93292458 (+) |
| G456899 | NA | non-coding | downstream | 67741 | 93292747 ~ 93293069 (+) |
| G456901 | NA | non-coding | downstream | 69264 | 93294270 ~ 93294496 (+) |
| G456860 | NA | non-coding | downstream | 73114 | 93298120 ~ 93300018 (+) |
| G456731 | cp | other | upstream | 180368 | 93002003 ~ 93041462 (+) |
| G456139 | LOC106560602 | other | upstream | 1221072 | 91943154 ~ 92000758 (+) |
| dda1 | LOC106560571 | other | upstream | 1541099 | 91678060 ~ 91681757 (+) |
| G455469 | NA | other | upstream | 1731840 | 91487745 ~ 91489990 (+) |
| G455211 | NA | other | upstream | 2159209 | 91061090 ~ 91062621 (+) |
| G456927 | NA | other | downstream | 123788 | 93348794 ~ 93349619 (+) |
| G458015 | NA | other | downstream | 910912 | 94135918 ~ 94136269 (+) |
| G459346 | hdlbp | other | downstream | 2477974 | 95696263 ~ 95706519 (+) |
| G459843 | NA | other | downstream | 3022280 | 96247286 ~ 96247962 (+) |
