Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110524878 |
| gene name | LOC106560653 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 94094979 ~ 94099229 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| L-selectin isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036978902.1 | True | 1281 | mRNA | 0.46 | 7 | 94094979 | 94099229 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524879 | LOC106560647 | coding | downstream | 506 | 94072988 ~ 94094473 (-) |
| atf6 | atf6 | coding | downstream | 160731 | 93809803 ~ 93934248 (-) |
| si:dkeyp-82a1.6 | LOC106560500 | coding | downstream | 385042 | 93705716 ~ 93709937 (-) |
| LOC110524842 | NA | coding | downstream | 392434 | 93652863 ~ 93702545 (-) |
| use1 | use1 | coding | downstream | 442439 | 93640464 ~ 93652540 (-) |
| LOC110524880 | LOC106592820 | coding | upstream | 4370 | 94103599 ~ 94115079 (-) |
| scyl3 | scyl3 | coding | upstream | 66009 | 94165238 ~ 94174003 (-) |
| LOC110524883 | LOC106560651 | coding | upstream | 113247 | 94212476 ~ 94221154 (-) |
| zgc:153916 | LOC106560658 | coding | upstream | 136233 | 94235462 ~ 94286184 (-) |
| lmo4b | lmo4 | coding | upstream | 728877 | 94828106 ~ 94863090 (-) |
| G458160 | NA | non-coding | downstream | 90881 | 94002456 ~ 94004098 (-) |
| G458159 | NA | non-coding | downstream | 93886 | 94000542 ~ 94001093 (-) |
| G458136 | NA | non-coding | downstream | 134620 | 93959439 ~ 93960359 (-) |
| G457925 | NA | non-coding | downstream | 158540 | 93936211 ~ 93936439 (-) |
| G457918 | NA | non-coding | downstream | 185627 | 93907441 ~ 93909352 (-) |
| G458221 | NA | non-coding | upstream | 18872 | 94118101 ~ 94134771 (-) |
| G458219 | NA | non-coding | upstream | 33778 | 94133007 ~ 94133532 (-) |
| G458231 | NA | non-coding | upstream | 36736 | 94135965 ~ 94136230 (-) |
| G458258 | NA | non-coding | upstream | 82281 | 94181510 ~ 94199088 (-) |
| G458260 | NA | non-coding | upstream | 85315 | 94184544 ~ 94201958 (-) |
| G457909 | NA | other | downstream | 231365 | 93860846 ~ 93863614 (-) |
| G457742 | NA | other | downstream | 631900 | 93462352 ~ 93463079 (-) |
| G457740 | NA | other | downstream | 652566 | 93441900 ~ 93442413 (-) |
| G457595 | NA | other | downstream | 1074699 | 93018394 ~ 93020280 (-) |
| G457537 | NA | other | downstream | 1127987 | 92950678 ~ 92966992 (-) |
| G459282 | NA | other | upstream | 1459461 | 95558690 ~ 95559210 (-) |
| G459323 | NA | other | upstream | 1503194 | 95602423 ~ 95602927 (-) |
| G459813 | NA | other | upstream | 2088239 | 96187468 ~ 96187983 (-) |
| G460020 | NA | other | upstream | 2361678 | 96460907 ~ 96464598 (-) |
| G460331 | NA | other | upstream | 2681614 | 96780843 ~ 96782021 (-) |
