si:dkey-66a8.7 (LOC105028143)


Basic Information

Item Value
gene id si:dkey-66a8.7
gene name LOC105028143
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 97757371 ~ 97783787 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036978959.1
AACGCTCATTTTTAAAGCAATGCTAGCGACAGTTGATCCAGAGTCAGTCATAATAAGTAAAGGCATTTTTTTAAACGGTCGAGCGTAAACACAATAGCGAAaccaggaaatgcaaacttgggTGATATTCCCACATTGTTGTTCGCTTTTATAGAGGTGTCACTATTTCGGTTTGAGAGTTTCTGTCTGGAACTGATAGAGGAACCGATGGGAATTATTTGCAATGAAGTGGTGTCATGAGTAGAAACCACTGGGTTTCGACTTGTGCATGTCAGTGGGAACTTCGGGAGACAGAGCACTGACACGAATGAATGTCCACGGAAGTTGCAATGTATTCTGATGAGGATAACCAGAataatgaggactggatgacaaATTTGCCAGAGGAGCTGTGGGATGTGCCTCTTTCAAGTCTCGCCATACCAGGAAGTCATGATGCTATGAGCTACTCCCTGGACATCAACTCTCCTCTGATCCGCTCTGAGTCTGACACCTTTAGACTCCTGGATGGTCTCTTCTACTGCCTCACCAGACCTGCTATCTACAGGTGGTCTACCACGCAGGAAAAAGGTATTGTGGAGCAGCTATCAGAGGGGATTCGATACTTCGACCTCCGAATCGCCCACAAACCGTACGACCCGTCCAACGAACTGTATTTTACACACGTCATTTACACTCATCTGACAGTGGTGGAAACTCTGAGGGCCGTAGCCTCGTGGTTGGAGTCTCACTCCAGGGAGGTTGTTATCCTAGCATGCAGTCACTTTGAAGGACTCAACGACAAACTACATGAACATTTAATTTTCTCACTGAAGAAAATCTTTGGGTCTAAACTCTGTCCTCGCAAGGAGACAGTGGTGACCCTGCGTGGTCTGTGGGCATTGGGTTACCAGGTACTGCTGTCGTATGATGACCAGTCAGCAGCACGACACCAGGCTCTGTGGCCAGGTATACCGTACTGGTGGGCCAACCAATACACGGCCAGCGGGGTGGTCAGCTATCTGGACTGGCAGAAAGACATGGGACGCCCAGATGGTTTCTTTGTGTCTGGTCTGAACCTGACGGCTGACCGCTCCTACATCGCGCTGCACCCCCGCCAGTCCCTGCAGACCCTAACTCTGGCTAACTGGAAGGAGCTGAGGCCGTGGCTGGAGGAACAGGTCCCTGGACCACACCCTAACAACCTCAACATCATAGCAGGAGACTTTATAGGACCTGTCCCCTTCTGTCCTCTGGTCATCAACCTCAATAGAAAACTGTTACGGCAGCAGAGGATGGATGAGAGGACTcttagaggagaggatagatgaGAGGAATcttagaggagaggatagatgaGAGGAATCTTAGAGGAGAGGACtattagaggagaggatagatgaGAGGAATcttagaggagaggatagatgaGAGGAAtcttagaggagaggaggactgacCGACCTTCAGATGAGAAATAAAATACCTAGTTTAGGGAGTAATTCCATCAAAAATAAGTGATTCAAAGAGAACAGAAAACTGCTACATCAGCAAAGTTACGACCGAGGACAACCAGTCATTATTTAGTTTCACTGGGAATCATACAGACCACAGAAAGTCATTCCAATAGAAGGTCTAGATACTTCAGAAAtggttcacaccccttgactttttacacattttgttgcagcctgaatttaaaatggattacattgagattttgtgtcactggcctacacataattccactttgacatgatgtggtattatgtttttaga
>XM_036978960.1
CAACGCTCATTTTTAAAGCAATGCTAGCGACAGTTGATCCAGAGTCAGTCATAATAAGTAAAGGCATTTTTTTAAACGGTCGAGCGTAAACACAATAGCGAAaccaggaaatgcaaacttgggTGATATTCCCACATTGTTGTTCGCTTTTATAGAGGTGTCACTATTTCGGTTTGAGAGTTTCTGTCTGGAACTGATAGAGGAACCGATGGGAATTATTTGCAATGAAGTGGTGTCATGAGTAGACGGAAGTTGCAATGTATTCTGATGAGGATAACCAGAataatgaggactggatgacaaATTTGCCAGAGGAGCTGTGGGATGTGCCTCTTTCAAGTCTCGCCATACCAGGAAGTCATGATGCTATGAGCTACTCCCTGGACATCAACTCTCCTCTGATCCGCTCTGAGTCTGACACCTTTAGACTCCTGGATGGTCTCTTCTACTGCCTCACCAGACCTGCTATCTACAGGTGGTCTACCACGCAGGAAAAAGGTATTGTGGAGCAGCTATCAGAGGGGATTCGATACTTCGACCTCCGAATCGCCCACAAACCGTACGACCCGTCCAACGAACTGTATTTTACACACGTCATTTACACTCATCTGACAGTGGTGGAAACTCTGAGGGCCGTAGCCTCGTGGTTGGAGTCTCACTCCAGGGAGGTTGTTATCCTAGCATGCAGTCACTTTGAAGGACTCAACGACAAACTACATGAACATTTAATTTTCTCACTGAAGAAAATCTTTGGGTCTAAACTCTGTCCTCGCAAGGAGACAGTGGTGACCCTGCGTGGTCTGTGGGCATTGGGTTACCAGGTACTGCTGTCGTATGATGACCAGTCAGCAGCACGACACCAGGCTCTGTGGCCAGGTATACCGTACTGGTGGGCCAACCAATACACGGCCAGCGGGGTGGTCAGCTATCTGGACTGGCAGAAAGACATGGGACGCCCAGATGGTTTCTTTGTGTCTGGTCTGAACCTGACGGCTGACCGCTCCTACATCGCGCTGCACCCCCGCCAGTCCCTGCAGACCCTAACTCTGGCTAACTGGAAGGAGCTGAGGCCGTGGCTGGAGGAACAGGTCCCTGGACCACACCCTAACAACCTCAACATCATAGCAGGAGACTTTATAGGACCTGTCCCCTTCTGTCCTCTGGTCATCAACCTCAATAGAAAACTGTTACGGCAGCAGAGGATGGATGAGAGGACTcttagaggagaggatagatgaGAGGAATcttagaggagaggatagatgaGAGGAATCTTAGAGGAGAGGACtattagaggagaggatagatgaGAGGAATcttagaggagaggatagatgaGAGGAAtcttagaggagaggaggactgacCGACCTTCAGATGAGAAATAAAATACCTAGTTTAGGGAGTAATTCCATCAAAAATAAGTGATTCAAAGAGAACAGAAAACTGCTACATCAGCAAAGTTACGACCGAGGACAACCAGTCATTATTTAGTTTCACTGGGAATCATACAGACCACAGAAAGTCATTCCAATAGAAGGTCTAGATACTTCAGAAAtggttcacaccccttgactttttacacattttgttgcagcctgaatttaaaatggattacattgagattttgtgtcactggcctacacataattccactttgacatgatgtggtattatgtttttaga
>XM_036978961.1
TCAACGCTCATTTTTAAAGCAATGCTAGCGACAGTTGATCCAGAGTCAGTCATAATAAGTAAAGGCATTTTTTTAAACGGTCGAGCGTAAACACAATAGCGAAaccaggaaatgcaaacttgggTGATATTCCCACATTGTTGTTCGCTTTTATAGAGGTGTCACTATTTCGGTTTGAGAGTTTCTGTCTGGAACTGATAGAGGAACCGATGGGAATTATTTGCAATGAAGTGGTGTCATGAGTAGAAACCACTGGGTTTCGACTTGTGCATGTCAGTGGGAACTTCGGGAGACAGAGCACTGACACGAATGAATGTCCACGGAAGTTGCAATGTATTCTGATGAGGATAACCAGAataatgaggactggatgacaaATTTGCCAGAGGAGCTGTGGGATGTGCCTCTTTCAAGTCTCGCCATACCAGGAAGTCATGATGCTATGAGCTACTCCCTGGACATCAACTCTCCTCTGATCCGCTCTGAGTCTGACACCTTTAGACTCCTGGATGGTCTCTTCTACTGCCTCACCAGACCTGCTATCTACAGGTGGTCTACCACGCAGGAAAAAGGTATTGTGGAGCAGCTATCAGAGGGGATTCGATACTTCGACCTCCGAATCGCCCACAAACCGTACGACCCGTCCAACGAACTGTATTTTACACACGTCATTTACACTCATCTGACAGTGGTGGAGACAGTGGTGACCCTGCGTGGTCTGTGGGCATTGGGTTACCAGGTACTGCTGTCGTATGATGACCAGTCAGCAGCACGACACCAGGCTCTGTGGCCAGGTATACCGTACTGGTGGGCCAACCAATACACGGCCAGCGGGGTGGTCAGCTATCTGGACTGGCAGAAAGACATGGGACGCCCAGATGGTTTCTTTGTGTCTGGTCTGAACCTGACGGCTGACCGCTCCTACATCGCGCTGCACCCCCGCCAGTCCCTGCAGACCCTAACTCTGGCTAACTGGAAGGAGCTGAGGCCGTGGCTGGAGGAACAGGTCCCTGGACCACACCCTAACAACCTCAACATCATAGCAGGAGACTTTATAGGACCTGTCCCCTTCTGTCCTCTGGTCATCAACCTCAATAGAAAACTGTTACGGCAGCAGAGGATGGATGAGAGGACTcttagaggagaggatagatgaGAGGAATcttagaggagaggatagatgaGAGGAATCTTAGAGGAGAGGACtattagaggagaggatagatgaGAGGAATcttagaggagaggatagatgaGAGGAAtcttagaggagaggaggactgacCGACCTTCAGATGAGAAATAAAATACCTAGTTTAGGGAGTAATTCCATCAAAAATAAGTGATTCAAAGAGAACAGAAAACTGCTACATCAGCAAAGTTACGACCGAGGACAACCAGTCATTATTTAGTTTCACTGGGAATCATACAGACCACAGAAAGTCATTCCAATAGAAGGTCTAGATACTTCAGAAAtggttcacaccccttgactttttacacattttgttgcagcctgaatttaaaatggattacattgagattttgtgtcactggcctacacataattccactttgacatgatgtggtattatgtttttaga

Function

NR:

description
PI-PLC X domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036978959.1 False 1758 mRNA 0.47 6 97757371 97783785
XM_036978960.1 False 1686 mRNA 0.47 7 97757371 97783786
XM_036978961.1 True 1604 mRNA 0.47 5 97757371 97783787

Neighbor

gene id symbol gene type direction distance location
LOC110524862 LOC106560604 coding downstream 564836 97173967 ~ 97192535 (-)
LOC118964738 NA coding downstream 595372 97160785 ~ 97161999 (-)
LOC110524866 LOC106560606 coding downstream 600301 97156048 ~ 97157070 (-)
trnap-cgg-2 NA coding downstream 916536 96840764 ~ 96840835 (-)
trnap-ugg-8 NA coding downstream 916798 96840502 ~ 96840573 (-)
jade3 LOC107585190 coding upstream 12456 97796243 ~ 97840872 (-)
LOC110524920 LOC106590813 coding upstream 67191 97850978 ~ 97872968 (-)
LOC110524891 nipa2 coding upstream 184138 97967925 ~ 97984344 (-)
LOC118964707 herc2 coding upstream 208166 97991094 ~ 98008384 (-)
LOC118964705 NA coding upstream 451228 98235015 ~ 98236445 (-)
G461396 gtpbp6 non-coding downstream 2285 97744596 ~ 97755086 (-)
G461404 NA non-coding downstream 3204 97753770 ~ 97754167 (-)
G461403 NA non-coding downstream 4031 97751153 ~ 97753340 (-)
G461360 NA non-coding downstream 49254 97705649 ~ 97708117 (-)
G461349 tomm70 non-coding downstream 55834 97698048 ~ 97701537 (-)
G461423 NA non-coding upstream 24099 97807886 ~ 97808883 (-)
G461443 NA non-coding upstream 98816 97882603 ~ 97883096 (-)
G461452 NA non-coding upstream 124897 97908684 ~ 97909366 (-)
G461473 NA non-coding upstream 219906 98003693 ~ 98005649 (-)
G460985 NA other downstream 248740 97508109 ~ 97508631 (-)
G460736 NA other downstream 477045 97278402 ~ 97280326 (-)
G460720 NA other downstream 488340 97268741 ~ 97269031 (-)
G460623 NA other downstream 726982 97028519 ~ 97030389 (-)
G460354 NA other downstream 928218 96824235 ~ 96831126 (-)
G461505 NA other upstream 298235 98082022 ~ 98082682 (-)
G461871 NA other upstream 686569 98470356 ~ 98470720 (-)
G462022 NA other upstream 1011771 98795558 ~ 98800879 (-)

Expression


Co-expression Network